Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1258
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118343-1|AAM48372.1|  488|Drosophila melanogaster LD46760p pro...    30   2.3  
AE014298-1175|AAF46371.2|  488|Drosophila melanogaster CG1440-PA...    30   2.3  
AY118408-1|AAM48437.1| 1005|Drosophila melanogaster RE63030p pro...    28   9.3  
AE014296-1428|AAF50437.2| 1005|Drosophila melanogaster CG7112-PA...    28   9.3  

>AY118343-1|AAM48372.1|  488|Drosophila melanogaster LD46760p
           protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 6   NCVSL-FTKIARTEEYEISHTYREYREGVQNANIFLNYALK 125
           NC+ L F K    +E+E S  +  Y + ++  N FLN  +K
Sbjct: 114 NCIRLPFMKNYNLDEFEFSQAFLFYWDKIERCNYFLNNVVK 154


>AE014298-1175|AAF46371.2|  488|Drosophila melanogaster CG1440-PA
           protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 6   NCVSL-FTKIARTEEYEISHTYREYREGVQNANIFLNYALK 125
           NC+ L F K    +E+E S  +  Y + ++  N FLN  +K
Sbjct: 114 NCIRLPFMKNYNLDEFEFSQAFLFYWDKIERCNYFLNNVVK 154


>AY118408-1|AAM48437.1| 1005|Drosophila melanogaster RE63030p
           protein.
          Length = 1005

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +1

Query: 208 FSCHSFRCHTPP---KRLDDFDEIFCAYPVSM 294
           F CH FRCH P    +    F + F  YP SM
Sbjct: 166 FQCHVFRCHIPEAVNQVSACFQKAFQTYPPSM 197


>AE014296-1428|AAF50437.2| 1005|Drosophila melanogaster CG7112-PA
           protein.
          Length = 1005

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +1

Query: 208 FSCHSFRCHTPP---KRLDDFDEIFCAYPVSM 294
           F CH FRCH P    +    F + F  YP SM
Sbjct: 166 FQCHVFRCHIPEAVNQVSACFQKAFQTYPPSM 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,115,317
Number of Sequences: 53049
Number of extensions: 485640
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)