Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1256
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         150   3e-38
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         150   3e-38
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         150   3e-38
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          140   5e-35
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   8.3  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  150 bits (364), Expect = 3e-38
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -3

Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
           MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY E
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365

Query: 326 SGPSIVHRKCF 294
           SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376



 Score = 83.0 bits (196), Expect = 7e-18
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -1

Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
           +L  P  LGM+ACGIHETTYNSI+KCDVDIRKDLYANTVLSGGT
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 304


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  150 bits (364), Expect = 3e-38
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -3

Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
           MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY E
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365

Query: 326 SGPSIVHRKCF 294
           SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376



 Score = 83.0 bits (196), Expect = 7e-18
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -1

Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
           +L  P  LGM+ACGIHETTYNSI+KCDVDIRKDLYANTVLSGGT
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 304


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  150 bits (364), Expect = 3e-38
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -3

Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
           MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY E
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365

Query: 326 SGPSIVHRKCF 294
           SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376



 Score = 83.0 bits (196), Expect = 7e-18
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -1

Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
           +L  P  LGM+ACGIHETTYNSI+KCDVDIRKDLYANTVLSGGT
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 304


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  140 bits (338), Expect = 5e-35
 Identities = 64/71 (90%), Positives = 66/71 (92%)
 Frame = -3

Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
           MYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EY E
Sbjct: 306 MYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDE 365

Query: 326 SGPSIVHRKCF 294
            GP IVHRKCF
Sbjct: 366 GGPGIVHRKCF 376



 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -1

Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
           +L  P  LGM++ GIHET YNSI++CDVDIRKDLYAN+VLSGGT
Sbjct: 261 ALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGT 304


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 337 STTSLAPPLYTGSASKRTARRCLQQPAAAAQFRLV 233
           S  +L   LY GSAS+    R LQQ  +    + V
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQAV 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,885
Number of Sequences: 2352
Number of extensions: 13747
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)