Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1256
(646 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 142 2e-34
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 140 5e-34
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 140 5e-34
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 140 5e-34
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 136 2e-32
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 136 2e-32
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 135 2e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 135 2e-32
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 123 9e-29
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 118 3e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 107 8e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 97 7e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 79 2e-15
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 53 1e-07
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 48 7e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 42 5e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.003
At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid sy... 34 0.093
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 31 0.87
At2g39440.1 68415.m04841 expressed protein 31 0.87
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.1
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.5
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 4.6
At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate 1-p... 28 4.6
At5g43500.2 68418.m05318 expressed protein 28 6.1
At5g43500.1 68418.m05319 expressed protein 28 6.1
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 28 6.1
At3g63130.1 68416.m07090 RAN GTPase activating protein 1 (RanGAP... 27 8.1
At2g42760.1 68415.m05295 expressed protein 27 8.1
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 142 bits (344), Expect = 2e-34
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EY E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+A GIHETTYNSI+KCDVDIRKDLY N VLSGG+
Sbjct: 263 LFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 140 bits (340), Expect = 5e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+ GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 140 bits (340), Expect = 5e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+A GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 140 bits (340), Expect = 5e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+ GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 136 bits (328), Expect = 2e-32
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EY E
Sbjct: 307 MFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 366
Query: 326 SGPSIVHRKCF 294
+GP IVHRKCF
Sbjct: 367 AGPGIVHRKCF 377
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+A GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 136 bits (328), Expect = 2e-32
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EY E
Sbjct: 307 MFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 366
Query: 326 SGPSIVHRKCF 294
+GP IVHRKCF
Sbjct: 367 AGPGIVHRKCF 377
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+A GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 2e-32
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY E
Sbjct: 307 MFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+ GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 2e-32
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY E
Sbjct: 307 MFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 326 SGPSIVHRKCF 294
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+ GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 123 bits (297), Expect = 9e-29
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EY E
Sbjct: 308 MFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDE 367
Query: 326 SGPSIVHRKCF 294
G +IVHRKCF
Sbjct: 368 QGGAIVHRKCF 378
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 619 LGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
+GM+ GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 270 IGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 306
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 118 bits (284), Expect = 3e-27
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY E
Sbjct: 259 MFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEE 318
Query: 326 SGPSIVHRKCF 294
+GP+IVH KCF
Sbjct: 319 NGPAIVHTKCF 329
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+ GIHE TYNSI+KCD DIRKDLY N VLSGGT
Sbjct: 215 LFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGT 257
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 107 bits (256), Expect = 8e-24
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
M GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY E
Sbjct: 296 MLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEE 355
Query: 326 SGPSIVHRKC 297
G +IVHRKC
Sbjct: 356 HGAAIVHRKC 365
Score = 54.8 bits (126), Expect = 5e-08
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +G ++ GIHE T NSI+KC VD R+D+Y N +++GGT
Sbjct: 252 LFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGT 294
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 342
M+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 307 MFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1
Query: 637 LSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
L P +GM+A GIHETTYNSI+KCDVDIRKDLY N VLSGGT
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = -3
Query: 494 IADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKQEYXES 324
+ +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY E
Sbjct: 372 LKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEH 431
Query: 323 GPSIVHRKC 297
G S + RKC
Sbjct: 432 GASYIQRKC 440
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 601 GIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
G+ SI KCDVDIR++LY++ +L+GGT
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGT 366
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = -3
Query: 497 GIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKQE 336
G R QKE L S ++ ++ PPE YS W+GG+ILA + Q ++K +
Sbjct: 291 GFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKAD 349
Query: 335 YXESGPSIVHRKCF 294
Y E+GPS+VHRKCF
Sbjct: 350 YDETGPSVVHRKCF 363
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
+L P LG++ GI E I + + L NTVL GGT
Sbjct: 243 ALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGT 286
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
++P + +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY E
Sbjct: 350 LFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEE 409
Query: 326 SGPSIVHRKCF 294
G + R+ F
Sbjct: 410 LGSARCRRRFF 420
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
+L P LGM G+ E +I C ++ LY + +L+GG+
Sbjct: 305 TLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGS 348
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Frame = -3
Query: 506 MYPGIADRMQKEI------TALAPST-----MKIKIIAPPERKYSVWIGGSILAS-LSTF 363
MYPG+ R++KEI T L + ++++I PP RK+ V++GG++LA +
Sbjct: 306 MYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDA 365
Query: 362 QQMWISKQEYXESGPSIVHR 303
+ WI++++Y E G + +++
Sbjct: 366 PEFWINREDYMEEGINCLNK 385
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 640 SLSNPRSLGMKACGIHETTYNSIIKCDVDIRKDLYANTVLSGGT 509
+L P + ++ G+ + + I + D+D R LY + VLSGG+
Sbjct: 261 ALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGS 304
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = -3
Query: 446 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXESGPSI 312
+++ +++ P ++++VW GGS+L+S F +K+EY E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = -3
Query: 500 PGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 333
PG+++R+++E+ PS++ I++I PP + W G ++++LS F W I+++++
Sbjct: 405 PGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid
synthase family protein similar to cyclopropane synthase
[Sterculia foetida] GI:21069167; contains Pfam profile
PF02353: Cyclopropane-fatty-acyl-phospholipid synthase
Length = 406
Score = 33.9 bits (74), Expect = 0.093
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 376 EARIDPPIHTEYFLSGGAMILIFIVDGARAVIS-FCIRSAIPGYMGYHRTIRCWR 537
E+R+ TEY GG + + V A A S CI + + Y+ T+RCWR
Sbjct: 281 ESRLTSGFITEYIFPGGCLPSLARVTSAMASSSRLCIENVENIGIHYYHTLRCWR 335
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -3
Query: 506 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYXE 327
+ PG+ +R++ I + P I ++ + W G S A+ F +K +Y E
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 326 SG 321
G
Sbjct: 709 KG 710
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 30.7 bits (66), Expect = 0.87
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGVP 515
R+P G E GEDR DP + + R NDL + + + D S+VH +P
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAADENSIVDLSSQVHQLP 96
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 396 DPYGVLPLWRSNDLNLHCRW-GESCD 470
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 390 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 497
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 506
P GV+PL NDL+ WG S F + +H
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLH 227
>At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate
1-phosphotransferase-related / pyrophosphate-dependent
6-phosphofructose-1-kinase-related similar to
pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit SP:Q41140 from [Ricinus communis]
Length = 614
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 453 WGESCDFLLHTVGDSRVHGVPPDNTVLAYKSLRMSTSHFMME 578
W + + L ++G +H D AY LR + F+ME
Sbjct: 493 WSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLME 534
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -3
Query: 497 GIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQEYX 330
G+ +++ + P T I + + E ++ W GG+IL L ++ WI + ++
Sbjct: 497 GLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWM 556
Query: 329 ESG 321
+G
Sbjct: 557 VNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -3
Query: 497 GIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQEYX 330
G+ +++ + P T I + + E ++ W GG+IL L ++ WI + ++
Sbjct: 509 GLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWM 568
Query: 329 ESG 321
+G
Sbjct: 569 VNG 571
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 399 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 506
P GV+PL NDL+ WG S F + +H
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLH 224
>At3g63130.1 68416.m07090 RAN GTPase activating protein 1 (RanGAP1)
contains Pfam PF00560: Leucine Rich Repeat domains;
identical to RAN GTPase activating protein 1
(GI:6708466)[Arabidopsis thaliana]
Length = 535
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 533 QHRIVRWYPMYPGIADRMQKEITALAPSTMKIKII 429
QH + Y M GI++ + + L PST KI+++
Sbjct: 236 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 474 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTNVDLETRVXRVW 322
GN ++RP +E DHC R+ ++ I R+P + VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,379,339
Number of Sequences: 28952
Number of extensions: 278443
Number of successful extensions: 798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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