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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1255
         (367 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20876| Best HMM Match : Ribosomal_S7e (HMM E-Value=0)              124   2e-29
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)        29   1.5  
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)                  28   2.0  
SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0)                28   2.0  
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           27   3.5  
SB_47345| Best HMM Match : Neural_ProG_Cyt (HMM E-Value=8.3)           27   3.5  
SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.5  
SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11)                 27   4.7  
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)                     27   6.2  
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)                    26   8.1  

>SB_20876| Best HMM Match : Ribosomal_S7e (HMM E-Value=0)
          Length = 157

 Score =  124 bits (299), Expect = 2e-29
 Identities = 61/100 (61%), Positives = 77/100 (77%)
 Frame = +3

Query: 3   KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 182
           KI+K  G  A+ FE  ISQA++ELE NSD+KAQLRELYI+ AKEI++  KK+III+VP+P
Sbjct: 10  KIVKPQGETANEFEQGISQAILELEMNSDMKAQLRELYISSAKEIDVGGKKAIIIFVPVP 69

Query: 183 KLKAFQKIQIRLVRELEKKFSGKH*SLLETVRSCLSPATK 302
           +++AFQKIQ RLVRELEKKFSGKH  ++   R    P  K
Sbjct: 70  QIRAFQKIQTRLVRELEKKFSGKHVVIVAQRRILPRPTRK 109


>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
          Length = 3107

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
 Frame = +3

Query: 6    IIKASGAEADSFETSISQALVELETNSDLKAQLRE----LYITKAKEIELHNKKSIIIYV 173
            ++++SG   +S E+   +     E N+ LK +L E    L +T+ +E E+ N K + +YV
Sbjct: 1681 VLESSGGTMNSEESFFLE-----EDNAILKRKLDEKETALKVTQDREREM-NDKLMALYV 1734

Query: 174  PMPKLKAFQKIQIRLVRELEKK 239
             M KL++ Q        ELEK+
Sbjct: 1735 NMSKLESTQGTLEEKNAELEKE 1756


>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
          Length = 1552

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 33  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM-PKLKAFQ 200
           + ++T ++     L  +  L+  +RELY    +E E   KKS++ ++ + PK+K  +
Sbjct: 171 EQWDTILTMIPARLVQSPQLQPYIRELYAEVKQEYEASIKKSMVQHILVKPKVKGVE 227


>SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 1831

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 85   PTSKPNFGSFTLQKLKKLNYTIRS 156
            P S  N+G FT+++LK  +YT +S
Sbjct: 1415 PLSNDNYGDFTMRRLKVSSYTEQS 1438


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 9/42 (21%)
 Frame = +1

Query: 64  WSNSKPTPTSKPN--------FG-SFTLQKLKKLNYTIRSRS 162
           WS+ KPTP  KPN        FG   T Q L+K N+ +  RS
Sbjct: 125 WSDPKPTPGCKPNTFRGGGCYFGPDVTSQVLRKHNFELLVRS 166


>SB_47345| Best HMM Match : Neural_ProG_Cyt (HMM E-Value=8.3)
          Length = 151

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 11/26 (42%), Positives = 21/26 (80%)
 Frame = +3

Query: 171 VPMPKLKAFQKIQIRLVRELEKKFSG 248
           VP+P++ A QK++ +L R++E+K +G
Sbjct: 69  VPLPQVSAMQKVKGKL-RDMEQKLNG 93


>SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 380

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
 Frame = +3

Query: 24  AEADSFETSISQALVELETNSDLKAQLRELYITKAKEI-----ELHNKKSIIIYVPMPKL 188
           A+  +   +  Q   E++T+ + K  +RE  ITK K +     E   +++++    + K+
Sbjct: 237 AQRKTLSDAAKQCSTEIKTSENKKMTIREDMITKRKHVRDRRREHREEETVLRKDELDKV 296

Query: 189 KAFQKIQIRLVRELEKKF---SGKH*SLLETVR 278
               + + + +RE+E++F     K+ ++LE  R
Sbjct: 297 AKLYEEEKQDLREMEQEFQNMEAKYNAILEERR 329


>SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11)
          Length = 137

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 117 ITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIR---LVRELEKKFSGKH*SLLETVRSCL 287
           +++ + + LHN +   + V + KLK  +++ +R   LV    +  + K  SLLE    C+
Sbjct: 45  LSRLRSLSLHNNRLTTLPVEIVKLKNLEELSLRDNPLVVRFVRDMAFKPPSLLELSGRCI 104


>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
          Length = 612

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +3

Query: 171 VPMPKLKAFQKIQIRLVRELEKKFSG 248
           VP+P+++A QK++  L R +E+K +G
Sbjct: 190 VPLPQVRAMQKVKGEL-RNMEQKLNG 214


>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
          Length = 591

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 24  AEADSFETSISQALVEL--ETNSDLKAQLRELYITKAKE-IELHNKKSIII 167
           A+ +S + ++ +   E   +   D KAQL EL + KAKE   L   KS  +
Sbjct: 217 AQQESLKETLQEQEKETIQQLEEDFKAQLNELEVEKAKEQTALEEMKSFTV 267


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,130,478
Number of Sequences: 59808
Number of extensions: 177492
Number of successful extensions: 411
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 582596255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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