Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1253
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    29   0.17 
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    28   0.30 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.5  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 529 THI*LYTLRLLSNFCYCLKSVVKLRIG*YWYL 624
           TH+ +   +LL    YC+   +   +G YWY+
Sbjct: 147 THVTMVDFKLLQVIPYCVLDTITYMMGGYWYM 178


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 14  PGSHKKKQELRSSTMYV--RVKTENSRLFLGTYSYSFTIR 127
           P S++++ EL+   + +  ++   ++R F+GTY  +FT R
Sbjct: 373 PESYEQRAELKDGGVAIVDQIVCSHARYFIGTYESTFTYR 412


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -3

Query: 239  KFQIYYSTLPSCLWLPRTNKHRVIKTKPAKCIRYWRCTEL 120
            KF+ + + LP C ++P+  +  +I  K   C  +W   +L
Sbjct: 1743 KFEPHDNWLPPCYYVPKELEQTLIDAKIPAC--HWNLADL 1780


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 331  FSKFADVLSTHVILRGYRSQWYSNLI 254
            FS F  +LST V+ RG+ ++    LI
Sbjct: 3014 FSVFLQILSTAVMTRGFTNRVVKPLI 3039


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,261
Number of Sequences: 2352
Number of extensions: 14022
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)