Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1253
(664 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 26 0.37
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 26 0.37
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.37
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.37
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.37
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.37
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 26 0.37
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 26 0.37
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.37
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 23 3.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.4
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 23 3.4
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 4.5
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 4.5
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 6.0
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 7.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 7.9
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 3 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 61
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.37
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVKQ-KFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ +SR K++ + Y L+N+ K + T SR+ E Y+ YREYRE
Sbjct: 252 SCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRE 310
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 525 THTHIIIYSSFIVKLLLLLKVCGQIEN 605
TH ++ SF+V LL++ C + N
Sbjct: 9 THLITVLLFSFVVILLIIPSKCEAVSN 35
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 277 SCNHVKSRGSKERPQIY*NLYNIYVK-QKFYTLF*AISRTEE-----YEISYTYREYRE 435
SC+ ++R KE+ + Y LYN K + T SR+ E Y+ YR+YRE
Sbjct: 3 SCSKDRNREYKEKDRRYEKLYNEKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRE 61
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 525 THTHIIIYSSFIVKLLLLLKVCGQIEN 605
TH ++ SF+V LL++ C + N
Sbjct: 9 THLITVLLFSFVVILLIIPSKCEAVSN 35
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 241 KFMSQLD*NTIDSCNHVKSRGSKERPQIY 327
K S +D T+D N V E+PQ Y
Sbjct: 34 KTESGIDQQTVDDINEVNFDVEDEKPQRY 62
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 241 KFMSQLD*NTIDSCNHVKSRGSKERPQIY 327
K S +D T+D N V E+PQ Y
Sbjct: 34 KAESGIDQQTVDDINEVNFDVEDEKPQRY 62
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 378 LKKGIKFLLYVN 343
LK+GI+F LY+N
Sbjct: 357 LKQGIQFHLYIN 368
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 534 HIIIYSSFIVKLLLLLKVCGQIENRL 611
H I+ S + + VCG+IEN +
Sbjct: 462 HSIVLGSLLNPSHMYRAVCGRIENTI 487
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LFLGTYSYSFTIRCIASN 142
LFL YSY F I+ +A++
Sbjct: 229 LFLIIYSYWFIIQAVAAH 246
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LFLGTYSYSFTIRCIASN 142
LFL YSY F I+ +A++
Sbjct: 105 LFLIIYSYWFIIQAVAAH 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,685
Number of Sequences: 438
Number of extensions: 4088
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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