Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1252
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    26   1.00 
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    26   1.3  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.0  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   5.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.3  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -2

Query: 203 YTNFLPFLLS-TTPVCHGIVYKKSTNTQQIAMATKSTS 93
           Y N L    S  +P  HG V KKST T  +   T  TS
Sbjct: 635 YKNLLHACRSYLSPYQHGFVPKKSTTTNLVEFVTYCTS 672


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -2

Query: 203 YTNFLPFLLS-TTPVCHGIVYKKSTNTQQIAMATKSTS 93
           Y N L    S  +P  HG V KKST T  +   T  TS
Sbjct: 20  YNNLLYACRSYLSPYQHGFVPKKSTTTNLVEFVTYYTS 57


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 66  LIVKLFVIIACGLCCHCYLLSVC 134
           +++ L V++ CG  C+  ++++C
Sbjct: 190 VLIMLPVVVMCGYVCNLKVMTIC 212


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 390 TSSTPNRSHRGPAAVPFHQAQ-RALSATDKETSRKRPTALHSDQ 518
           TSS P   HR    VP H A+ + L AT    S +    L  D+
Sbjct: 150 TSSVPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEPVNLLPDDE 193


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 390 TSSTPNRSHRGPAAVPFHQAQ-RALSATDKETSRKRPTALHSDQ 518
           TSS P   HR    VP H A+ + L AT    S +    L  D+
Sbjct: 150 TSSVPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEPVNLLPDDE 193


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 448 RNEHFQPRTRRRAESD 495
           RN HF  RT RRA  D
Sbjct: 681 RNSHFLGRTARRALGD 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,032
Number of Sequences: 2352
Number of extensions: 14261
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)