Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1251
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.72 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.9  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   5.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +1

Query: 367 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAATLRSCR 546
           + EE+DE   ++PA +   V+E+  R R     + KL  +        R  +     +  
Sbjct: 475 AVEEDDEDAIEKPAPVKISVQEVLNRVRKP---TKKLHLKNSPISKKVRPPQVLCYITSW 531

Query: 547 GSRRWSAGDCTPESLKGPSC 606
             +R  AG  TPE +    C
Sbjct: 532 SQKRPGAGKFTPEDINPSLC 551


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 514 ICGRGPVPIL 485
           ICG+GP PI+
Sbjct: 366 ICGKGPYPIM 375


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 514 ICGRGPVPIL 485
           ICG GP PIL
Sbjct: 367 ICGNGPYPIL 376


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 514 ICGRGPVPIL 485
           ICG GP PIL
Sbjct: 367 ICGNGPYPIL 376


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 317 EWLRRTQRRSRTAPDP 364
           EW+++T  +S+  P+P
Sbjct: 125 EWIKKTSYQSQPNPEP 140


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 317 EWLRRTQRRSRTAPDP 364
           EW+++T  +S+  P+P
Sbjct: 125 EWIKKTSYQSQPNPEP 140


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 528 DAPLLQRIKEMVGGRLHTGKPQGS 599
           +APL Q +   +GG ++   P  S
Sbjct: 424 EAPLFQNVLPPIGGMMNWNMPSTS 447


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 327 DGLRDDPERHRTPV 368
           +GLRD P ++ TP+
Sbjct: 53  EGLRDCPRKYSTPL 66


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 327 DGLRDDPERHRTPV 368
           +GLRD P ++ TP+
Sbjct: 49  EGLRDCPRKYSTPL 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,304
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)