Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1251
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    29   0.13 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   2.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.5  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 319 MAETDSETIPNGTGPLSTEEEDERLKQRPADID-ADVREMERRKRVEALMSSKLFREELE 495
           + E   E +P    P     E+E+ ++  AD + AD  E E  +  + L  ++L  EELE
Sbjct: 61  LPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELE 120


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 418 ADVREMERRKRVEALMSSKL-FREELERVLDRRCTRAATLRSCRGSR 555
           A+   +E  K +   +S+K   RE+L R + RR TRA ++   R  R
Sbjct: 35  AEQLRIETIKSIAHKISTKRQIREQLARTVHRRATRAKSIGLLRRYR 81


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -3

Query: 505 RGPVPILR-GTASRT*ELRRASGVPFRGHRRRCRPDAASSARLPPRWT 365
           R  +P  R   A+   E RR      R  RRRCRP A    R PP  T
Sbjct: 474 RRTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRPRA---RRNPPATT 518


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = -2

Query: 149  H*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVIS 45
            H   NII +    Y S Y      L  TAC G  S
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAGTNS 3136


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 354 HRTPVHRGGRRALEAASGRHRRRCPRN-GTPEARRSSHVLEA 476
           H +PV  GGR  +      +RR+      TP   R +H   A
Sbjct: 465 HWSPVFMGGRSGILGRESENRRKLVTTVSTPVFDRRNHSTRA 506


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 370 TEEEDERLKQRPADIDADVREMERRK 447
           T E  + ++ R AD +A  RE+ER++
Sbjct: 20  TRESLQAIEARIADEEAKQRELERKR 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,805
Number of Sequences: 2352
Number of extensions: 15236
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)