Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1251
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 50 1e-06
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 50 1e-06
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 50 1e-06
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 50 1e-06
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 50 1e-06
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 50 1e-06
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 50 1e-06
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 29 2.2
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 2.9
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical... 29 3.8
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 28 5.1
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 28 5.1
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 5.1
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 5.1
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 28 6.7
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 28 6.7
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 28 6.7
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 28 6.7
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 8.9
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 27 8.9
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 8.9
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 397 QRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAAT 531
QRPA I D+ EMERRKRV+ ++ SK F ELE V+ + C A T
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTART 71
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 326 RRTQRRSRT-APDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGS 502
RR+ RSR+ + PPRR++ + S R P + S S+ RS S S
Sbjct: 397 RRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRDRRRYS 456
Query: 503 STADARGRRRSAPAEDQGDGRRETAHRK 586
D R RRRS + + R T+ R+
Sbjct: 457 --PDRRERRRSRSRDRRRHRSRSTSRRR 482
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Frame = +3
Query: 309 SCRNG*DGLRDDPE---RHRTPV--HRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLE 473
S R DG R P R R+P H + A+ RRR R E R +H
Sbjct: 412 SSRGAADGPRHSPASRPRPRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHHAM 471
Query: 474 AVPRRIGTGPRPQMHEGGDAPLL 542
+ R + P PQ PLL
Sbjct: 472 PIARVSASVPAPQQSRKMSEPLL 494
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 373 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDRRCTRAATLRSCRGS 552
E +++R ++ +D +D E E RKR ++ S K R+ D R + + CR S
Sbjct: 157 ERKEKRRRRDDSDDSSDSDEEEDRKRKKSKESKKEKRKRRHSSSDDRSASSDSDDDCRDS 216
Query: 553 RR 558
+R
Sbjct: 217 KR 218
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 376 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 495
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 376 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 495
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 376 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 495
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>U41036-1|AAA82384.1| 315|Caenorhabditis elegans Hypothetical
protein T14E8.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 319 MAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELER 498
M E D + + N + S EEE+ + + D D +E ERR++ EA R L
Sbjct: 248 MNEKDDDDV-NKSVEESDEEEENQESEEQEDNDKAEKEEERRRQEEAARQHSKRRRTLRH 306
Query: 499 VLDRRCT 519
+L + +
Sbjct: 307 LLQLKAS 313
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = +2
Query: 65 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLICRYAGPSAGP 238
RC CK++ + C +Q C + + S+ C+N FVC L C G
Sbjct: 231 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDCS-DGSDEDD 289
Query: 239 CMTPEDSC 262
C C
Sbjct: 290 CADVRTEC 297
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = +2
Query: 65 RCLLS*CCKNYKENDKCVFLQI*CFVLSACYDRRSNLCVN--FVCSDHLICRYAGPSAGP 238
RC CK++ + C +Q C + + S+ C+N FVC L C G
Sbjct: 233 RCDAEVDCKDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDCS-DGSDEDD 291
Query: 239 CMTPEDSC 262
C C
Sbjct: 292 CADVRTEC 299
>AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical
protein Y38E10A.4 protein.
Length = 419
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 478 FREELERVLDRRCTRAATLRSCRGSRRWSAGDCTPESLKGPSCVLPINDIRGIERN 645
F+ V RC ++ + RG +WS+GDC ES + C LP+ + ++N
Sbjct: 112 FKSGFPLVEKGRCVYSSQVAFDRG--QWSSGDCEKES-RAFVCELPVTNEDQCQKN 164
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 368 PPRRKTSA*SSVRPTSTPMSAKW-NAGSASKLSCPRSCSAKNWNGSSTADARGRRRSAPA 544
PP R+ V+PTS P + W + L NW + + RGR+
Sbjct: 45 PPHRRGHNYELVKPTSNPEAMSWTHEDEFELLKAAHKFKMGNWGEIAESIGRGRKDGHNC 104
Query: 545 ED 550
+D
Sbjct: 105 KD 106
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 368 PPRRKTSA*SSVRPTSTPMSAKW-NAGSASKLSCPRSCSAKNWNGSSTADARGRRRSAPA 544
PP R+ V+PTS P + W + L NW + + RGR+
Sbjct: 58 PPHRRGHNYELVKPTSNPEAMSWTHEDEFELLKAAHKFKMGNWGEIAESIGRGRKDGHNC 117
Query: 545 ED 550
+D
Sbjct: 118 KD 119
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 302 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 457
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 302 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 457
R E+ E R R + T P P R++++ + P+ KWN G+AS+
Sbjct: 876 RDEIHEIQSRRSRANSTGRSPYPKRKESARGAGAPKGPPPVQHKWN-GNASQ 926
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.7
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Frame = -3
Query: 550 ILCRSGASPPSCICGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRPDAASSARLPPR 371
I C +GA + R P R ++S + R +G P + SS+ P
Sbjct: 22 ITCATGAGSEIALVARDPTTYYRPSSSNSDPTYRETGTPISWSEGGGGLSSTSSSSCPSA 81
Query: 370 WTGVRCRSGSSLSPSQP-------FRQLESIDLSSKTWVSNPVARVFRSHARSS 230
+ SS SP QP R+ S SS ++ + + + S + SS
Sbjct: 82 SSQFPLILRSSPSPPQPPQQQHAQHREYSSFSFSSSSFTTPSSSSSYSSSSSSS 135
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.7
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Frame = -3
Query: 550 ILCRSGASPPSCICGRGPVPILRGTASRT*ELRRASGVPFRGHRRRCRPDAASSARLPPR 371
I C +GA + R P R ++S + R +G P + SS+ P
Sbjct: 22 ITCATGAGSEIALVARDPTTYYRPSSSNSDPTYRETGTPISWSEGGGGLSSTSSSSCPSA 81
Query: 370 WTGVRCRSGSSLSPSQP-------FRQLESIDLSSKTWVSNPVARVFRSHARSS 230
+ SS SP QP R+ S SS ++ + + + S + SS
Sbjct: 82 SSQFPLILRSSPSPPQPPQQQHAQHREYSSFSFSSSSFTTPSSSSSYSSSSSSS 135
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 152 CYDRRSNLCVNFVCSDHLICRYAGPSAGPCMTPEDSCYRI 271
C D +N V D L+C+++ + G + E CY +
Sbjct: 482 CIDINANRTVLASIEDTLVCKWSDIATGETLLQEPGCYSV 521
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 341 RSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTADAR 520
+SR+ P P RR+ S +S P P AK S+ P + ++ + S + A
Sbjct: 335 KSRSKSPPAPARRRRSPSASKSPPPAPKRAK------SRSKSPPARRRRSPSASKSPPAP 388
Query: 521 GRRRSAPAEDQGDGRRE 571
RRRS +RE
Sbjct: 389 RRRRSPSKSRSPAPKRE 405
>Z81109-9|CAB54295.1| 226|Caenorhabditis elegans Hypothetical
protein R10D12.13c protein.
Length = 226
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 373 EEEDERLKQRPAD-IDADVREMERRKRVEALMSSKLFREELERVLDR 510
EE DE ++ D I+ +EMER ++EA L E ++VL R
Sbjct: 133 EEGDEESTEKVEDEIETMRKEMERLSKIEAEQYDDLDENETQQVLRR 179
>Z81109-8|CAB54296.1| 270|Caenorhabditis elegans Hypothetical
protein R10D12.13b protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 373 EEEDERLKQRPAD-IDADVREMERRKRVEALMSSKLFREELERVLDR 510
EE DE ++ D I+ +EMER ++EA L E ++VL R
Sbjct: 177 EEGDEESTEKVEDEIETMRKEMERLSKIEAEQYDDLDENETQQVLRR 223
>Z81109-7|CAB03248.1| 268|Caenorhabditis elegans Hypothetical
protein R10D12.13a protein.
Length = 268
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 373 EEEDERLKQRPAD-IDADVREMERRKRVEALMSSKLFREELERVLDR 510
EE DE ++ D I+ +EMER ++EA L E ++VL R
Sbjct: 175 EEGDEESTEKVEDEIETMRKEMERLSKIEAEQYDDLDENETQQVLRR 221
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +2
Query: 425 SAKWNAGSASKLSCPRSCSAKNWNGSSTADARGRRRSAPAEDQGDGRRETAHRKASRVLA 604
+A+ + SA+ + ++ +K W GS A AED+G GR A L
Sbjct: 483 NAQMDENSANNVRTQQTLMSK-WQGSFDASCEEMMDGGDAEDRGHGRLNPAFPVPKASLL 541
Query: 605 AFCRSTTSEVLKG 643
+ RS S G
Sbjct: 542 STPRSMDSNTSPG 554
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 152 CYDRRSNLCVNFVCSDHLICRYAGPSAGPCMTPEDSCYRI 271
C D +N V D L+C+++ + G + E CY +
Sbjct: 482 CIDINANRTVLASIEDTLVCKWSDIATGETLLQEPGCYSV 521
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/85 (29%), Positives = 33/85 (38%)
Frame = +1
Query: 325 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 504
E+ I NG L + D R RE ERR+ + SS+ FR+ L +
Sbjct: 100 ESREYVIENGVKRLVNQHYDSRGYSSAGRGQKGRREEERRRNMAVDYSSQDFRQSL-AAI 158
Query: 505 DRRCTRAATLRSCRGSRRWSAGDCT 579
D+ A R G R GD T
Sbjct: 159 DQASRDGAISRGEDGVRVRQIGDTT 183
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/85 (29%), Positives = 33/85 (38%)
Frame = +1
Query: 325 ETDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 504
E+ I NG L + D R RE ERR+ + SS+ FR+ L +
Sbjct: 70 ESREYVIENGVKRLVNQHYDSRGYSSAGRGQKGRREEERRRNMAVDYSSQDFRQSL-AAI 128
Query: 505 DRRCTRAATLRSCRGSRRWSAGDCT 579
D+ A R G R GD T
Sbjct: 129 DQASRDGAISRGEDGVRVRQIGDTT 153
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 331 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 456
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -3
Query: 436 PFRGHRRRCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVAR 257
P R HRR+ P +R P + + + ++ PS ++ ++ L S +W + PVA+
Sbjct: 49 PIRHHRRQLEP-----SRSAPLASTEQPVAQATTHPSTENARVPALVLRSGSWRALPVAQ 103
Query: 256 VFRSHARSSRWP 221
SH R WP
Sbjct: 104 GGSSHIRI--WP 113
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 331 DSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKRVE 456
+S T+ N GP+ E EDE PA I R+ ++R R E
Sbjct: 1694 ESATVTNLEGPVKIEIEDENWMAPPA-ITETSRKSKKRLRAE 1734
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,038,612
Number of Sequences: 27780
Number of extensions: 338826
Number of successful extensions: 1375
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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