Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1249
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1513 - 34107700-34107765,34108475-34108551,34108640-341086... 33 0.18
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 32 0.31
10_02_0072 - 4936950-4937363 31 0.71
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 31 0.71
01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667 31 0.71
06_01_0410 + 2928382-2930973 31 0.94
05_05_0370 + 24466565-24468031 30 1.2
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 30 1.2
02_05_0662 + 30703820-30704671 30 1.2
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 2.2
04_04_0895 - 29168107-29168229,29168617-29170068 29 2.2
02_05_0084 - 25690346-25691206 29 2.2
01_06_1582 - 38430573-38430599,38430750-38430857,38431503-384315... 29 2.2
01_05_0623 - 23768426-23768794 29 2.2
08_01_0920 - 9065573-9065680,9066330-9066566,9066671-9066844,906... 29 2.9
03_02_0090 - 5564326-5567280 29 2.9
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 29 2.9
01_01_0208 + 1780275-1781123 29 2.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.8
05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975 29 3.8
04_03_0060 - 10511421-10512494 29 3.8
03_06_0100 - 31647506-31647664,31647752-31647835,31647933-316480... 29 3.8
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 29 3.8
02_05_0617 + 30383334-30383579,30383592-30383681,30383772-303839... 29 3.8
11_03_0130 - 10474607-10475994,10479609-10479706,10479878-104800... 28 5.0
10_08_1037 - 22477358-22478752 28 5.0
01_06_0309 - 28373346-28373403,28373504-28373571,28374012-283741... 28 5.0
12_02_0190 + 15170991-15171369,15172048-15172273,15172626-15172746 28 6.7
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 28 6.7
08_02_0191 + 14041201-14043894,14044354-14044632 28 6.7
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718 28 6.7
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 28 6.7
04_04_0180 - 23356802-23356843,23357681-23358201,23358283-233583... 28 6.7
02_05_0496 - 29499959-29500653,29501039-29501093 28 6.7
10_07_0161 - 13674631-13675433,13675793-13675862 27 8.8
09_02_0113 + 4408171-4409415,4409902-4409907 27 8.8
08_02_0771 - 21028295-21028753 27 8.8
07_03_0074 + 13068874-13069524 27 8.8
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 27 8.8
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 27 8.8
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 27 8.8
>04_04_1513 -
34107700-34107765,34108475-34108551,34108640-34108688,
34109144-34109218,34109447-34109554,34109728-34109835,
34110708-34111256
Length = 343
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = -1
Query: 500 GVTAR---SHGGSTEPARNPWQR--RPHRRGPRMPADGPAPPHRRREHRLLYLSH-QVSP 339
GV AR + GG PA PWQR P RR R P PA RR Y + ++ P
Sbjct: 54 GVLARGFQADGGEVSPANPPWQRCPPPPRRRFRSP---PARDGRRSSRAPTYSTRFRLPP 110
Query: 338 VTDLVAGFCLSPVSVLERR 282
+ + CLS ++ RR
Sbjct: 111 PLAIASVHCLSDLAPRPRR 129
>01_07_0374 + 43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +3
Query: 42 EGDSRGYRSAEE-QARELARSIRREVAKLADKWNTLVDRSDAWGRCLDDAVQRVRAFTNS 218
EGD AEE + +A S KL +TL++ + + ++QRV+ F
Sbjct: 771 EGDESEKVKAEELRLPAVATSSSPLENKLRKDIDTLLEENLEFWMKFSSSLQRVQEFQRK 830
Query: 219 LDELASRVQAAERPGLHGEDQATLKHRHWRETKSSYQISYWRNLM 353
DEL ++Q A G Q + + R K+ Q+ +N M
Sbjct: 831 HDELMQQLQPAATDGNSDTKQKQKQEQQLRALKTELQVWSEQNAM 875
>10_02_0072 - 4936950-4937363
Length = 137
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = -1
Query: 473 STEPARNPWQRRPHRRGPRMPADGPAPPHRRREHRLLYLSHQVSPVTDLVAGFCLSPVSV 294
S+ PA R + + PA A HR EHR S Q +P D A F L +
Sbjct: 73 SSRPAAGAAAVRADTKPRKHPAAATARAHRGVEHRRRAASRQTTPAKDESANFMLMTFTT 132
Query: 293 L 291
L
Sbjct: 133 L 133
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 271 P*RPGRSAAWTLLASSSRELVKARTRCTASSKHLPHASLRS 149
P RP R +AW L S E +KA R ASS L + R+
Sbjct: 327 PKRPVRISAWKLAKLDSNEAMKAAARARASSSVLKPVNTRA 367
>01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667
Length = 567
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 113 LAADRAGQLAGLF--LSRPVAAGVAFAVSRWFSITGVG 6
LAA RAG+ GL LSR AA V + V+ W + G G
Sbjct: 73 LAAHRAGERDGLCRELSRAPAAKVTYRVAGWVGLQGAG 110
>06_01_0410 + 2928382-2930973
Length = 863
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 132 KWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAERPGLH 269
+W T D WG+ L VR DE+ SR+ +A LH
Sbjct: 25 QWTTHGGSDDCWGQDLSHGGDTVRGARQVFDEMPSRLGSAAGAALH 70
>05_05_0370 + 24466565-24468031
Length = 488
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = -1
Query: 398 APPHRRREHRLLYL----SHQVSPVTDLVAGFCLSPVSVLERRLVLAMKTWPFSCLDSAG 231
A R ++ R+L++ + + P TDL + ++E +A+ S + SA
Sbjct: 2 ASAERSKKLRILFIPFFATSHIGPFTDLAVRLAAARPDIVEP--TIAVTPANVSVVRSA- 58
Query: 230 ELVKRVGEGSYALYSIIQAPAPRVAAVDQGVPLVSELG 117
VKR G + ++ SI + P P VA + GV +S G
Sbjct: 59 --VKRHGSVASSMVSIAKYPFPDVAGLSPGVENLSTAG 94
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 491 ARSHGGSTEPARNPWQRRPH---RRGPRMPADGPAPPHRRREHR 369
+RS S PA N +R P RR PR P D +PP + + R
Sbjct: 222 SRSPRRSISPAANGKERNPSPNGRRSPRSPQDRVSPPPKDNDER 265
>02_05_0662 + 30703820-30704671
Length = 283
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 512 RSLAGVTARSHGGSTEPARNPWQRRPHRR-GPRMPADGPAPPHRRREHRL 366
R+ AG R S + NP R H+R P D APP R+R L
Sbjct: 228 RAFAGALRRFRALSADANSNPTATRVHKRPSPETEDDLAAPPPRQRRRTL 277
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 385 RWGGAGPSAGMRGPRRWGRRCQGF 456
R GG G G GPRRW R F
Sbjct: 85 RMGGGGGGGGFGGPRRWDREPNPF 108
>04_04_0895 - 29168107-29168229,29168617-29170068
Length = 524
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 230 ELVKRVGEGSYALYSIIQAPAPRVAA--VDQGVPLVSELGHLAADRAGQLAGLFLSRPVA 57
E + R+ +G Y + R+ A + GVPL G D G L GL + PVA
Sbjct: 252 EALARMQDGCIRRYPALYGSDDRIQACMAELGVPLTKHPGFHQYDVYGDLLGLLAAHPVA 311
>02_05_0084 - 25690346-25691206
Length = 286
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 482 HG--GSTEPARNPWQRRPHRRGPRMPADGPA 396
HG GS+ P R+PW H PA PA
Sbjct: 160 HGSTGSSPPVRSPWHANHHAAAASTPAPAPA 190
>01_06_1582 -
38430573-38430599,38430750-38430857,38431503-38431569,
38431847-38432070,38432154-38432246,38432665-38432717,
38433122-38433572
Length = 340
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 212 GEGSYALYSIIQAPAPRVAAVDQGVPLVSELGHLAADRAGQLAGLFLSRPVAAGVAFAVS 33
G YAL+ ++ A V A+ +PL G L G + + +S +AA VAF ++
Sbjct: 153 GPAGYALFVLVYAGL-EVLAIP-AIPLTMSAGLLFGSITGTVI-VSISGTLAAAVAFLIA 209
Query: 32 RWFS 21
R+F+
Sbjct: 210 RYFA 213
>01_05_0623 - 23768426-23768794
Length = 122
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 388 WGGAGPSAGMRGPRRWGRRCQGFLAGSVDPPWERAVTP 501
W G +G GPRR + ++ P WER P
Sbjct: 70 WEGGPRRSGRGGPRRRRKEEVAYVGNMTSPAWERRTLP 107
>08_01_0920 -
9065573-9065680,9066330-9066566,9066671-9066844,
9067527-9067666,9069046-9069478
Length = 363
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +1
Query: 154 AATRGAG------AWMMLYSAYEPSPTLLTSSPAESKQLNGQVFMARTRRR-SSTDTGER 312
+++RGAG ++M YEPS S A ++L G+V R SS GE
Sbjct: 83 SSSRGAGRSRVLEGYLMATLFYEPSTRTRLSFEAAMRRLGGEVLTTENAREFSSAAKGET 142
Query: 313 QNPATRSVTG 342
R+V G
Sbjct: 143 LEDTIRTVEG 152
>03_02_0090 - 5564326-5567280
Length = 984
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 218 RVGEGSYALYSIIQAPAPRVAAVDQGVPLVSELGHLAADRAG 93
R G GS+A + AP P AAV L LG++A D G
Sbjct: 147 RRGVGSFAATTHQSAPTPAAAAVGTEDYLKEALGYIADDAVG 188
>02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618,
14050145-14050272,14050409-14050502,14050749-14051237,
14052622-14052915,14053602-14053732,14053829-14055440,
14055539-14055651,14055902-14056933,14057023-14057145,
14057250-14057688
Length = 1656
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 416 MPADGPAPPHRRREHRLLYLSHQVSPVTDLVAGFCLSPVSVLER 285
+P GP P+ RR R L+ + D + + L+PV LER
Sbjct: 1524 VPTHGPPTPNGRRNQRFLWKATAREAKVDGIMMWTLAPVLELER 1567
>01_01_0208 + 1780275-1781123
Length = 282
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 461 ARNPWQRRPHRRGPRMPADGPAPPHRRREHR 369
A PW+ R RR PA +PP RR R
Sbjct: 112 ASRPWKLRSRRRPAVAPASSASPPPERRAAR 142
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 18 DTEPSRDSEGDSRGYRSAEEQARELARSIRREVAKLADKWNTLVDRSD 161
DTE R +E DS+G++ ++ ++ S+ E K+ D +VD+SD
Sbjct: 315 DTELKRSAEKDSKGFKKSKLMMKQ---SVSNESEKI-DHKRIMVDKSD 358
>05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975
Length = 362
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 479 GGSTEPARNPWQRRPHRRGPRMPADGPAPPH 387
GGS +NP +R P R PR G A PH
Sbjct: 239 GGSKRHHKNPPRRVPRRAPPRGANAGDAKPH 269
>04_03_0060 - 10511421-10512494
Length = 357
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -1
Query: 515 IRSLAGVTARSHGGSTEPARNPWQRRPHRRGPRMPADGPAP-----PHRRREHRLLYL-S 354
+R+ A +R GGS R RR P +PA GP P HRR L+L +
Sbjct: 139 LRAAAISWSRGTGGSAGERRLRAAAISERRAPPLPAAGPPPTPAAGAHRRGARPRLHLRA 198
Query: 353 HQVSPVTD 330
H +S V +
Sbjct: 199 HLMSRVVE 206
>03_06_0100 -
31647506-31647664,31647752-31647835,31647933-31648089,
31648181-31648446,31648524-31648796,31648874-31648985,
31649112-31649331,31649476-31649899
Length = 564
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 455 NPWQRRPHRRGPRMPADGPAPPHRR 381
NP R H R PR+P APP RR
Sbjct: 11 NPTASRSHHR-PRLPLPAAAPPRRR 34
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 479 GGSTEPARNPWQRRPHRRGPRMPADGP 399
GG P R P++R +R GP P P
Sbjct: 47 GGGVGPTRRPFKRSGNRAGPYQPPKAP 73
>02_05_0617 +
30383334-30383579,30383592-30383681,30383772-30383901,
30384578-30384591
Length = 159
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 452 PWQRRPHRR--GPRMPADGPAPPHRRREHRLLYLSHQVSPVTD 330
P RR HRR P +PA+ PP RR H +++ V VTD
Sbjct: 55 PPPRRSHRRLIAPAVPAE--FPPSRRSRHLVVHPFMDVFHVTD 95
>11_03_0130 -
10474607-10475994,10479609-10479706,10479878-10480047,
10480382-10480465,10481359-10482009,10482016-10482084
Length = 819
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 261 GLHGEDQATLKHRHWRETKSSYQISYWRNLMT*IQESVLSAPVGRSGPVS 410
G+ GE A KH ++Y + YW N++ +S A G+SG S
Sbjct: 209 GIGGEASACCKHA------TAYDLDYWNNVVRYNYDSKDGASTGKSGETS 252
>10_08_1037 - 22477358-22478752
Length = 464
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 428 RGPRMPADGPAPPHRRREHRLLYLSHQ 348
RG +PA P P H+ HR L HQ
Sbjct: 234 RGDPLPASPPQPQHQHHPHRPLPPQHQ 260
>01_06_0309 -
28373346-28373403,28373504-28373571,28374012-28374132,
28374351-28374739
Length = 211
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 503 AGVTARSHGGSTEPARNPWQRRPHRRGPRMPAD 405
+ TA G +PAR+ W RR H R PAD
Sbjct: 71 SSATACEEGEREKPARSLWIRRGHGGDGRDPAD 103
>12_02_0190 + 15170991-15171369,15172048-15172273,15172626-15172746
Length = 241
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 387 VGRSGPVSWHAWPATVGPALPGVPRWFRGPTVGTSRHASQR 509
V R P H P P LPG P W PT S A+ R
Sbjct: 56 VSRVAPPRAHPLPIPAIPGLPGRPFWALPPTPRRSSTAAFR 96
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 485 SHGGSTEPARNPWQRRPHRRGPRMPADGPAPPHRRR 378
S G+T P R +R R R P G P RRR
Sbjct: 63 SRRGTTRPPRTRSRRSSCSRAARTPPSGARSPRRRR 98
>08_02_0191 + 14041201-14043894,14044354-14044632
Length = 990
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 132 KWNTLVDRSDAWGRCLDDAVQRVRAFTNSLDELASRVQAAERPGLH 269
+W T D WG+ L V DE+ SR+ +A LH
Sbjct: 22 QWTTHGGSDDCWGQDLSHGGDSVGGARQVFDEMPSRLGSAAGAALH 67
>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
Length = 756
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 494 TARSHGGSTEPARNPWQRRPHRRGPRMPADGPAPPH 387
TA++ ST ++ W+ +P P P G P H
Sbjct: 721 TAQNKPSSTPKSKKVWKEKPKTLAPSPPETGGKPAH 756
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +3
Query: 3 LSDTSDTEPSRDSEGDSRGYRSAEEQARELARSIRREVAKLADKWNTLVDRSDAWGRCLD 182
LS+ + S+ + ++ ++ + E KLAD L D W R L
Sbjct: 380 LSEAKKEKEQHISDAVDKAVNDKSKEIQQKIENAMLEKKKLADMNEKLTKNQDIWRRTLK 439
Query: 183 DAVQRVRA 206
+ +R RA
Sbjct: 440 EIEERERA 447
>04_04_0180 -
23356802-23356843,23357681-23358201,23358283-23358361,
23358470-23358472
Length = 214
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 411 WHAWPATVGPALPGVPRWFRGPTVGTSRHAS 503
WH PAT G ++PGV R T T+ A+
Sbjct: 115 WHGHPATPGRSVPGVGRIMYPVTTTTTATAA 145
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 437 PHRRGPRMPADGPAPPHRRREHRLLYLSHQVSP 339
PH++ P P PP ++++H + HQ P
Sbjct: 70 PHQQSPEPQPQTPPPPAQQQQHGPEHEHHQAQP 102
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 402 PVSWHAWPATVGPALPGVP--RW 464
P+SW +W + GP PG RW
Sbjct: 257 PLSWSSWAGSGGPLFPGTSHLRW 279
>09_02_0113 + 4408171-4409415,4409902-4409907
Length = 416
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 393 RSGPVSWHAWPATVGPALPGVPRWFRGPTV 482
R G SW A P G + P WF G V
Sbjct: 215 RDGECSWRALPRDTGVTVAFDPYWFEGRCV 244
>08_02_0771 - 21028295-21028753
Length = 152
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -1
Query: 173 PAPRVAAVDQGVPLVSELG--HLAADR-AGQLAGLFLSRPVAAGVAFAVSRWFSI 18
P+P +D + L ++AADR AG LAGL L+ AA A A F++
Sbjct: 60 PSPPALPLDPALALALAYAAAYVAADRRAGALAGLLLAAGWAASRALAARLGFAL 114
>07_03_0074 + 13068874-13069524
Length = 216
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 382 RRWGGAGPSAGMRGPRRWGRRCQGFLAGSVDPPWER 489
R GG G R R WG R +G + G DP R
Sbjct: 101 RGGGGEGEVERRRAARIWGCRRRGEVVGGADPRGRR 136
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 452 PWQRRPHRRGPRMPADGPAPPHRRREH 372
P Q+ PH MP+ P PPH H
Sbjct: 61 PHQQPPHFAAHAMPSPSPPPPHPAYMH 87
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 448 GSAGPTVAGHACQLTGPLLPTGAESTDS 365
G AGP AG + GPLLP+G +T S
Sbjct: 299 GGAGPPAAGTSA---GPLLPSGGGATGS 323
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 360 IQESVLSAPVGRSGPVSWHAWPATVGPALPGVPRWFRGPTVG-TSRHAS 503
+ ESV +P S PV+ A PA + P P PR TVG TS H S
Sbjct: 573 VMESVNCSP---SPPVAMPAHPALLLPPPPPPPRPCLSSTVGETSSHGS 618
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,983,294
Number of Sequences: 37544
Number of extensions: 458208
Number of successful extensions: 2304
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2298
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -