BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1249 (608 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 27 0.63 AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 26 1.1 AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 26 1.1 AY255857-1|AAP13483.1| 216|Anopheles gambiae glutathione tranfe... 25 2.5 AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 3.3 EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. 24 4.4 AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 5.8 AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 5.8 AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 7.7 >AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. Length = 897 Score = 26.6 bits (56), Expect = 0.63 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = +3 Query: 507 RPYYINHELETTHWG-PSE 560 R YY+NH +TT W P+E Sbjct: 176 RTYYVNHYTKTTQWSRPTE 194 >AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein protein. Length = 763 Score = 25.8 bits (54), Expect = 1.1 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = +3 Query: 453 VPRWFRGPTVGTSRHA-SQRPYYINHELETTH 545 V +FRGP GT RH+ Q+ H+ + H Sbjct: 456 VDAFFRGPDSGTDRHSEKQQQQQSQHQQQHQH 487 >AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein protein. Length = 763 Score = 25.8 bits (54), Expect = 1.1 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = +3 Query: 453 VPRWFRGPTVGTSRHA-SQRPYYINHELETTH 545 V +FRGP GT RH+ Q+ H+ + H Sbjct: 456 VDAFFRGPDSGTDRHSEKQQQQQSQHQQQHQH 487 >AY255857-1|AAP13483.1| 216|Anopheles gambiae glutathione tranferase d9 protein. Length = 216 Score = 24.6 bits (51), Expect = 2.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 427 RRWGRRCQGFLAGSVDPPWERAVT 498 RRW RC+ +AG D +RAVT Sbjct: 181 RRWYERCKEVIAGYTDLT-QRAVT 203 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 24.2 bits (50), Expect = 3.3 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 Query: 475 GPRNQRGTPGSAGP 434 GP+ +G PG AGP Sbjct: 725 GPKGDKGLPGLAGP 738 >EF592176-1|ABQ95972.2| 661|Anopheles gambiae laccase-3 protein. Length = 661 Score = 23.8 bits (49), Expect = 4.4 Identities = 9/29 (31%), Positives = 13/29 (44%) Frame = +3 Query: 372 VLSAPVGRSGPVSWHAWPATVGPALPGVP 458 + +A G S + WH P + GVP Sbjct: 128 ITNAMAGTSAAIHWHGLHQRATPYMDGVP 156 >AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific doublesex protein protein. Length = 241 Score = 23.4 bits (48), Expect = 5.8 Identities = 9/21 (42%), Positives = 10/21 (47%) Frame = -1 Query: 434 HRRGPRMPADGPAPPHRRREH 372 HRR P +P P P H H Sbjct: 134 HRRSPGVPHHVPEPQHMGATH 154 >AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doublesex protein protein. Length = 283 Score = 23.4 bits (48), Expect = 5.8 Identities = 9/21 (42%), Positives = 10/21 (47%) Frame = -1 Query: 434 HRRGPRMPADGPAPPHRRREH 372 HRR P +P P P H H Sbjct: 134 HRRSPGVPHHVPEPQHMGATH 154 >AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1 chain precursor protein. Length = 801 Score = 23.0 bits (47), Expect = 7.7 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -2 Query: 475 GPRNQRGTPGSAGP 434 GP+ RG PG GP Sbjct: 477 GPQGPRGYPGQPGP 490 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 667,030 Number of Sequences: 2352 Number of extensions: 15076 Number of successful extensions: 58 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 58 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 59291487 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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