Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1249
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           27   0.63 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   1.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   1.1  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    25   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.3  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   4.4  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   5.8  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.7  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +3

Query: 507 RPYYINHELETTHWG-PSE 560
           R YY+NH  +TT W  P+E
Sbjct: 176 RTYYVNHYTKTTQWSRPTE 194


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 453 VPRWFRGPTVGTSRHA-SQRPYYINHELETTH 545
           V  +FRGP  GT RH+  Q+     H+ +  H
Sbjct: 456 VDAFFRGPDSGTDRHSEKQQQQQSQHQQQHQH 487


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 453 VPRWFRGPTVGTSRHA-SQRPYYINHELETTH 545
           V  +FRGP  GT RH+  Q+     H+ +  H
Sbjct: 456 VDAFFRGPDSGTDRHSEKQQQQQSQHQQQHQH 487


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 427 RRWGRRCQGFLAGSVDPPWERAVT 498
           RRW  RC+  +AG  D   +RAVT
Sbjct: 181 RRWYERCKEVIAGYTDLT-QRAVT 203


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 475 GPRNQRGTPGSAGP 434
           GP+  +G PG AGP
Sbjct: 725 GPKGDKGLPGLAGP 738


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 372 VLSAPVGRSGPVSWHAWPATVGPALPGVP 458
           + +A  G S  + WH       P + GVP
Sbjct: 128 ITNAMAGTSAAIHWHGLHQRATPYMDGVP 156


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 434 HRRGPRMPADGPAPPHRRREH 372
           HRR P +P   P P H    H
Sbjct: 134 HRRSPGVPHHVPEPQHMGATH 154


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 434 HRRGPRMPADGPAPPHRRREH 372
           HRR P +P   P P H    H
Sbjct: 134 HRRSPGVPHHVPEPQHMGATH 154


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 475 GPRNQRGTPGSAGP 434
           GP+  RG PG  GP
Sbjct: 477 GPQGPRGYPGQPGP 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,030
Number of Sequences: 2352
Number of extensions: 15076
Number of successful extensions: 58
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)