BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1246 (563 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 2.1 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 2.8 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.9 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.5 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.6 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.6 DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 8.6 AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 8.6 >DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor protein. Length = 405 Score = 23.0 bits (47), Expect = 2.1 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -2 Query: 556 LTVAAIFTMSIIVIASQSSLVKLC*L----LRGIVDCFL 452 L +A +FTM IIV ++LV + LR + +CF+ Sbjct: 38 LVLAGLFTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFV 76 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 22.6 bits (46), Expect = 2.8 Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 2/32 (6%) Frame = -3 Query: 360 CLEAFQSSNITNTSQ*DR--CLKEQVKHHNFI 271 C + + N N D C + KHHNFI Sbjct: 101 CNNYWNTKNCVNPYDRDSLSCWLQMTKHHNFI 132 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 21.8 bits (44), Expect = 4.9 Identities = 4/14 (28%), Positives = 12/14 (85%) Frame = +3 Query: 396 EHEDEENWPLEDKP 437 + + +++WP+E++P Sbjct: 457 QQQQQQHWPMEEEP 470 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 21.4 bits (43), Expect = 6.5 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -1 Query: 242 YINILYNISQKYVMYYKL 189 +INIL + QKYV KL Sbjct: 340 FINILKFLKQKYVKNSKL 357 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.0 bits (42), Expect = 8.6 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -1 Query: 431 VLKRPILFIFMLHNSQHSKAVTQYVSRHFSLL 336 VLK +L F+LH S+ ++ Y + +L Sbjct: 5 VLKLLVLLTFLLHPSRCTQGKVNYREKEKEVL 36 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.0 bits (42), Expect = 8.6 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -1 Query: 431 VLKRPILFIFMLHNSQHSKAVTQYVSRHFSLL 336 VLK +L F+LH S+ ++ Y + +L Sbjct: 5 VLKLLVLLTFLLHPSRCTQGKVNYREKEKEVL 36 >DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. Length = 471 Score = 21.0 bits (42), Expect = 8.6 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 Query: 402 EDEENWPLEDKPCKINHKKQSTIPLNSQ 485 +DE +W LE++ + + K+S N Q Sbjct: 438 DDEAHWELEEESLQGSKIKESNSCSNDQ 465 >AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 protein. Length = 232 Score = 21.0 bits (42), Expect = 8.6 Identities = 6/15 (40%), Positives = 9/15 (60%) Frame = -1 Query: 548 CCHFHHVHNCNSKPV 504 CC H + + N KP+ Sbjct: 145 CCGVHSLSDYNDKPI 159 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 136,204 Number of Sequences: 438 Number of extensions: 2686 Number of successful extensions: 9 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16317903 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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