Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1242
(309 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4ZTX9 Cluster: Taurine catabolism dioxygenase TauD/Tfd... 34 0.54
UniRef50_Q67S05 Cluster: Putative alanine racemase; n=1; Symbiob... 33 0.94
UniRef50_A4CDW4 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_Q8BRM5 Cluster: 10 days neonate cortex cDNA, RIKEN full... 32 2.2
UniRef50_Q0LJZ4 Cluster: Tetratricopeptide TPR_2; n=1; Herpetosi... 31 5.0
UniRef50_Q2QXC0 Cluster: Expressed protein; n=4; Oryza sativa|Re... 31 5.0
UniRef50_O26832 Cluster: Coenzyme F420-reducing hydrogenase, del... 31 5.0
UniRef50_Q2JAR3 Cluster: Stearoyl-CoA 9-desaturase precursor; n=... 31 6.6
UniRef50_Q3W9U0 Cluster: Taurine catabolism dioxygenase TauD/Tfd... 31 6.6
UniRef50_Q82M01 Cluster: Putative ADP-ribosylglycohydrolase; n=2... 30 8.8
UniRef50_Q9SY85 Cluster: F14N23.31; n=4; Arabidopsis thaliana|Re... 30 8.8
UniRef50_Q551Q5 Cluster: Putative uncharacterized protein; n=2; ... 30 8.8
>UniRef50_Q4ZTX9 Cluster: Taurine catabolism dioxygenase TauD/TfdA;
n=3; Pseudomonas syringae group|Rep: Taurine catabolism
dioxygenase TauD/TfdA - Pseudomonas syringae pv.
syringae (strain B728a)
Length = 279
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 269 LNRKHLP--WRRRHGGRSLVKGCLLESIVGLALS 174
+ K LP W+ R G +SL+ GC + +VGL+L+
Sbjct: 182 IGEKELPLVWKHRSGRKSLILGCTAQQVVGLSLA 215
>UniRef50_Q67S05 Cluster: Putative alanine racemase; n=1;
Symbiobacterium thermophilum|Rep: Putative alanine
racemase - Symbiobacterium thermophilum
Length = 383
Score = 33.5 bits (73), Expect = 0.94
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 236 HGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQISDMYGALGETIIEA 78
+GG S +G + ++VG AL LH + +Y++ + D GE ++ A
Sbjct: 291 YGGGSYPRGHMQNALVGTALRRAPLHRPAAENIDYYLTLDDPLAREGEPVVAA 343
>UniRef50_A4CDW4 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 776
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = -2
Query: 218 VKGCLLESIVGLALSPLQLHSAGTLDFNYFIQISDMYGALGETIIEA 78
VK CL+ +I+GL +S + +++ TL+ F Q +Y ALG I++
Sbjct: 653 VKLCLIAAILGLVISFMTIYTIATLNQQRFQQTLAIYFALGAKPIQS 699
>UniRef50_Q8BRM5 Cluster: 10 days neonate cortex cDNA, RIKEN
full-length enriched library, clone:A830054H12
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: 10 days neonate cortex cDNA, RIKEN
full-length enriched library, clone:A830054H12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 112
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 305 LPPPSSHKSSLRLNRKHLPWRRRHGGRSLVK-GCLLESIVGLALSP 171
LPPP S LR PWRRR G R++ K +I+G+AL P
Sbjct: 35 LPPPIPWLSGLR---SKFPWRRRLGARAVAKTPWWWSAILGVALLP 77
>UniRef50_Q0LJZ4 Cluster: Tetratricopeptide TPR_2; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Tetratricopeptide TPR_2 -
Herpetosiphon aurantiacus ATCC 23779
Length = 1090
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -2
Query: 281 SSLRLNRKHLPWRRRHGGRSLVKGCLLESIVGL-ALSPLQLHSAGTLDFNYFI-QISDMY 108
+ L+L K++P + RH + +G L E +VGL L+ LQ D I Q++D+Y
Sbjct: 898 TGLQLAPKNIPIKSRHAQLMMRRGYLDEGLVGLDELAELQRKQGLVKDAVASIQQVADVY 957
Query: 107 GALGE 93
LG+
Sbjct: 958 WTLGK 962
>UniRef50_Q2QXC0 Cluster: Expressed protein; n=4; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 658
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 302 PPPSSHKSSLRLNRKHLPWRRRHGGRSLVKGC 207
P PS SS L+R H P RHG R L C
Sbjct: 63 PTPSPSSSSQSLDRHHPPPFARHGRRGLAAAC 94
>UniRef50_O26832 Cluster: Coenzyme F420-reducing hydrogenase, delta
subunit homolog; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep: Coenzyme
F420-reducing hydrogenase, delta subunit homolog -
Methanobacterium thermoautotrophicum
Length = 168
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 3 GLYCCQLLYRAASH--HSVMLASSV*SRFDNRF-TECPVHIANLDKIIKIESPSTMKLEW 173
G Y L+ A H V+ A +V F + +E P HI +D + E P T++L
Sbjct: 36 GPYLASLIQEAMEERGHLVINAGTVPENFTGKIRSERPSHILIVDAVEMREEPGTVRLIE 95
Query: 174 TESESDYGLEEAA 212
+S S+Y + A
Sbjct: 96 RDSISEYSISTHA 108
>UniRef50_Q2JAR3 Cluster: Stearoyl-CoA 9-desaturase precursor; n=8;
Actinomycetales|Rep: Stearoyl-CoA 9-desaturase precursor
- Frankia sp. (strain CcI3)
Length = 302
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2
Query: 287 HKSSLRLNRKHLPWRRRHGGRSLVKGCLLESIVGLALSP 171
HK S + H PWR H GR L KG L + VG P
Sbjct: 102 HKYSDQAADPHSPWRFGHHGRGLAKG-FLHAHVGWLFHP 139
>UniRef50_Q3W9U0 Cluster: Taurine catabolism dioxygenase TauD/TfdA;
n=1; Frankia sp. EAN1pec|Rep: Taurine catabolism
dioxygenase TauD/TfdA - Frankia sp. EAN1pec
Length = 268
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 254 LPWRRRHGGRSLVKGCLLESIVGL 183
L WRRR G RSLV G + IVG+
Sbjct: 178 LVWRRRDGRRSLVIGATTDHIVGM 201
>UniRef50_Q82M01 Cluster: Putative ADP-ribosylglycohydrolase; n=2;
Actinomycetales|Rep: Putative ADP-ribosylglycohydrolase
- Streptomyces avermitilis
Length = 355
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 266 NRKHLPWRRRHGGRSLVKGCLLESIVGLAL-SPLQLHSAGTLDFNY 132
+R +L W+ G R+ V+GCLL +G AL +P++ S + Y
Sbjct: 3 DRWNLSWQATAGYRARVRGCLLGGAIGDALGNPVEFASLDRIRAEY 48
>UniRef50_Q9SY85 Cluster: F14N23.31; n=4; Arabidopsis thaliana|Rep:
F14N23.31 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 302 PPPSSHKSSLRLNRKHLPWRRRHGGRSLVKGCLLESIVGL-ALSPL 168
PP S KSSLRL+ K WR H +L K +GL ALS +
Sbjct: 202 PPSSRKKSSLRLSYK---WREGHASGALCKCLYCSWFIGLPALSEI 244
>UniRef50_Q551Q5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 411
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 120 NLDK-IIKIESPSTMKLEWTESESDYGLEEAAFYQASTAVAPPP 248
NLD+ I++E+ ST W E + YGLE F + T +A P
Sbjct: 158 NLDESFIELEAESTFNNVWGELVTKYGLENLEFPKEITFLAGAP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,801,564
Number of Sequences: 1657284
Number of extensions: 5318604
Number of successful extensions: 15000
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14996
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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