Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1242
(309 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein. 30 1.6
AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein. 30 1.6
AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein. 30 1.6
AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein. 30 1.6
AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envel... 29 2.1
AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein. 29 2.8
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 29 2.8
BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein. 28 4.8
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 28 4.8
AK098303-1|BAC05281.1| 173|Homo sapiens protein ( Homo sapiens ... 28 4.8
AK098288-1|BAC05277.1| 173|Homo sapiens protein ( Homo sapiens ... 28 4.8
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 28 4.8
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 27 8.5
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 27 8.5
>BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 245 RRRHGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQI 120
R H RS+V ++ G LSP + H AG +D+N F+++
Sbjct: 1650 RENHLRRSIV---VIHPDTGRELSPEEAHRAGLIDWNMFVKL 1688
>AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 245 RRRHGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQI 120
R H RS+V ++ G LSP + H AG +D+N F+++
Sbjct: 1650 RENHLRRSIV---VIHPDTGRELSPEEAHRAGLIDWNMFVKL 1688
>AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 245 RRRHGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQI 120
R H RS+V ++ G LSP + H AG +D+N F+++
Sbjct: 1650 RENHLRRSIV---VIHPDTGRELSPEEAHRAGLIDWNMFVKL 1688
>AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein.
Length = 1426
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 245 RRRHGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQI 120
R H RS+V ++ G LSP + H AG +D+N F+++
Sbjct: 1320 RENHLRRSIV---VIHPDTGRELSPEEAHRAGLIDWNMFVKL 1358
>AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envelope
precursor protein.
Length = 1756
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 245 RRRHGGRSLVKGCLLESIVGLALSPLQLHSAGTLDFNYFIQI 120
R H RS+V ++ G LSP + H AG +D+N F+++
Sbjct: 1650 RENHLRRSIV---VIHLDTGRELSPEEAHRAGLIDWNMFVKL 1688
>AY358688-1|AAQ89051.1| 121|Homo sapiens GALI1870 protein.
Length = 121
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 226 LPPWRLLQGRC-FLFSLRLDLC 288
LPPW L GRC FL + + LC
Sbjct: 20 LPPWGLSHGRCGFLLYMEMTLC 41
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 PACTAVSCYIAPRP-ITVLCSPVQC 72
P C A SC AP P +T++C+PV C
Sbjct: 29 PPCCAPSC-CAPAPCLTLVCTPVSC 52
>BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein.
Length = 194
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 1 PACTAVSCYIAPRPITVLCSPVQCDLASIIVSPSAPYIS 117
PAC SC +++LC P C S++ P+ +S
Sbjct: 144 PACCTTSCCRPSSSVSLLCRPASC--VSLLCRPTCSRLS 180
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 1 PACTAVSCYIAPRPITVLCSPVQC 72
P C A SC +T++C+PV C
Sbjct: 29 PPCCAPSCCALAPCLTLVCTPVSC 52
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 PACTAVSCYIAPRP-ITVLCSPVQC 72
P C+A SC AP P ++++C+PV C
Sbjct: 29 PPCSAPSC-CAPAPSLSLVCTPVSC 52
>AK098303-1|BAC05281.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ40984 fis. ).
Length = 173
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 187 PTMDSRRQPFTRLLPPWRLL-QGRCFL 264
P + S PF RL PPW + GRC L
Sbjct: 86 PPLSSTPLPFPRLSPPWAFVCFGRCHL 112
>AK098288-1|BAC05277.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ40969 fis, clone UTERU2012688. ).
Length = 173
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 187 PTMDSRRQPFTRLLPPWRLL-QGRCFL 264
P + S PF RL PPW + GRC L
Sbjct: 86 PPLSSTPLPFPRLSPPWAFVCFGRCHL 112
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 PACTAVSCYIAPRP-ITVLCSPVQC 72
P C+A SC AP P ++++C+PV C
Sbjct: 29 PPCSAPSC-CAPAPSLSLVCTPVSC 52
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 PACTAVSCYIAPRP-ITVLCSPVQC 72
P C A SC AP P ++++C+PV C
Sbjct: 39 PPCCAPSC-CAPAPCLSLVCTPVSC 62
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 1 PACTAVSCYIAPRP-ITVLCSPVQC 72
P C A SC AP P ++++C+PV C
Sbjct: 39 PPCCAPSC-CAPAPCLSLVCTPVSC 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,763,739
Number of Sequences: 237096
Number of extensions: 819717
Number of successful extensions: 1746
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -