BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1241 (305 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080... 33 1.7 UniRef50_Q9AIZ4 Cluster: Alkyl hydroperoxide reductase small sub... 32 2.2 UniRef50_Q06J17 Cluster: DNA-directed RNA polymerase subunit bet... 32 2.9 UniRef50_Q897H1 Cluster: Membrane-associated protein; n=1; Clost... 31 5.0 UniRef50_Q01ZH1 Cluster: Putative uncharacterized protein precur... 31 6.7 UniRef50_A3U7C3 Cluster: Phenylacetic acid degradation protein; ... 30 8.8 >UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein PFB0800c - Plasmodium falciparum (isolate 3D7) Length = 1817 Score = 32.7 bits (71), Expect = 1.7 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 Query: 148 YYSTKKCFYLEINVQNIPFVSSL 216 YY+ KCFY +IN++NI F + + Sbjct: 1473 YYNISKCFYYKINIENIHFKNKI 1495 >UniRef50_Q9AIZ4 Cluster: Alkyl hydroperoxide reductase small subunit; n=6; Candidatus Carsonella ruddii|Rep: Alkyl hydroperoxide reductase small subunit - Carsonella ruddii Length = 177 Score = 32.3 bits (70), Expect = 2.2 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +1 Query: 145 AYYSTKKCFYLEINVQNIPFVSSLSKLISQNF-IYSYK 255 ++Y+ KK E+ N P +S +KLIS+NF IY+ K Sbjct: 73 SHYTHKKWIDEELTFVNFPLISDFNKLISKNFNIYNKK 110 >UniRef50_Q06J17 Cluster: DNA-directed RNA polymerase subunit beta; n=1; Bigelowiella natans|Rep: DNA-directed RNA polymerase subunit beta - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 1099 Score = 31.9 bits (69), Expect = 2.9 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 Query: 166 CFYLEINVQNIPFVSSLSKLISQNFIYS 249 CFYL+ + IPF S +S+NFIYS Sbjct: 919 CFYLQRRFKVIPFDESFGFEVSRNFIYS 946 >UniRef50_Q897H1 Cluster: Membrane-associated protein; n=1; Clostridium tetani|Rep: Membrane-associated protein - Clostridium tetani Length = 504 Score = 31.1 bits (67), Expect = 5.0 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -2 Query: 166 IFLSSNKQIEITISFNLCFTNIFN*NIFKLPKK*INSKIILTSHLLLKVYFFYTF 2 I L + K E+ +S + +F +I K+ K+ IN I+L HLL+ ++ F Sbjct: 21 IHLKNKKLKELKVSSTKLWEKVFE-DISKVKKRKINKYILLVLHLLIGIFIICAF 74 >UniRef50_Q01ZH1 Cluster: Putative uncharacterized protein precursor; n=1; Solibacter usitatus Ellin6076|Rep: Putative uncharacterized protein precursor - Solibacter usitatus (strain Ellin6076) Length = 1161 Score = 30.7 bits (66), Expect = 6.7 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = -2 Query: 205 QRGCSVHLFPNKNIFLSSNKQIEITISFNLCFT----NIFN*NIFKLPKK*INS 56 ++ +V +FPNKN +S K +T F + F N+FN +F P+ +NS Sbjct: 1084 RKNSTVRVFPNKNENVSLAKTFSVTERFRIDFRAEAFNVFNRVVFGGPQTSLNS 1137 >UniRef50_A3U7C3 Cluster: Phenylacetic acid degradation protein; putative transferase; n=5; Bacteria|Rep: Phenylacetic acid degradation protein; putative transferase - Croceibacter atlanticus HTCC2559 Length = 204 Score = 30.3 bits (65), Expect = 8.8 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -2 Query: 214 VKIQRGCSVHLFPNKNIFLSSNKQI 140 V +Q C+VH+FP K+I L + + Sbjct: 55 VNVQENCTVHMFPGKSIVLKAGAHV 79 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 254,945,492 Number of Sequences: 1657284 Number of extensions: 4379038 Number of successful extensions: 10204 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 9923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10201 length of database: 575,637,011 effective HSP length: 78 effective length of database: 446,368,859 effective search space used: 10266483757 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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