Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1241
         (305 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   2.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   3.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   3.4  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              20   6.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              20   6.0  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 163 FLSSNKQIEITISFNLC 113
           FL  N + ++ +SF LC
Sbjct: 125 FLHVNDECDVALSFKLC 141


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 190 VHLFPNKNIFLSSNKQIEITISFNLCFTNI 101
           + L P KN     + +  +TI F   F N+
Sbjct: 533 ITLQPGKNTIEQKSTKSSVTIPFERTFRNL 562


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 ANSNFYLLITRQKNVFIW 178
           A  NFY +    KNV +W
Sbjct: 99  ALGNFYFVHESLKNVLLW 116


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 83  KNVLIKNVCEAQIKANSNFYLLITRQKNVF 172
           +NV+ K V E  + +++N Y+   +    F
Sbjct: 94  ENVIKKLVAECSVISDANIYIRFNKLVKCF 123


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 83  KNVLIKNVCEAQIKANSNFYLLITRQKNVF 172
           +NV+ K V E  + +++N Y+   +    F
Sbjct: 94  ENVIKKLVAECSVISDANIYIRFNKLVKCF 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,348
Number of Sequences: 438
Number of extensions: 1275
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)