Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1240
         (533 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...    99   6e-20
UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and...    41   0.020
UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipopho...    39   0.062
UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans mor...    33   5.4  
UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- ...    32   9.5  
UniRef50_Q98RP0 Cluster: Putative uncharacterized protein orf467...    32   9.5  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score = 99.1 bits (236), Expect = 6e-20
 Identities = 47/84 (55%), Positives = 62/84 (73%)
 Frame = +1

Query: 1    AVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVN 180
            A++ SL+T+TP LKIGGGKN  Q+VG+ +H V+LLGEKKQ+KDSE +R TL+  DD   +
Sbjct: 3172 AMSASLVTSTPGLKIGGGKNAAQIVGYEKHGVLLLGEKKQSKDSEAVRATLEVEDDPFSD 3231

Query: 181  FVEGTGGYVFSSTNFEKLNAPQQK 252
             VE   G VFS++N+  L A QQK
Sbjct: 3232 AVEFANGVVFSASNYAALPAGQQK 3255



 Score = 56.8 bits (131), Expect = 3e-07
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 255  FIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 368
            FIQTAA+ I  ++  EQ+ Q CTC +VDPFRVRSVC N
Sbjct: 3257 FIQTAAHNIIQRMWREQIVQQCTCVFVDPFRVRSVCFN 3294


>UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)]; n=11;
            Eukaryota|Rep: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)] - Drosophila
            melanogaster (Fruit fly)
          Length = 3351

 Score = 40.7 bits (91), Expect = 0.020
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 67   QVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQ 246
            +++GF+   V  +  K   K     R  LQ  +D  ++FV   GG+VF++ NFEKL A  
Sbjct: 3242 KLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASD 3296

Query: 247  QK 252
            QK
Sbjct: 3297 QK 3298


>UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipophorin;
            n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
            apolipophorin - Nasonia vitripennis
          Length = 3385

 Score = 39.1 bits (87), Expect = 0.062
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +1

Query: 19   ITATPDLKIGGGKNLNQVVGFSEHSVVLLGE--KKQTKDSETLRGTLQKTD-DSCVNFVE 189
            ++   DL+I G K+   VVG+ +  V    +  KK  + S  L+  L   + D C  F  
Sbjct: 3251 VSPLKDLEING-KSQKNVVGYDKDYVYTFADSKKKPLEGSSDLKSNLATVNGDVCAGFAV 3309

Query: 190  GTGGYVFSSTNFEKLNAPQQ 249
             TGG  FS+ NF +    QQ
Sbjct: 3310 NTGGSAFSTHNFLEAKPNQQ 3329


>UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans
           morsitans|Rep: Lipophorin - Glossina morsitans morsitans
           (Savannah tsetse fly)
          Length = 835

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +1

Query: 52  GKNLNQVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEK 231
           G    +++GF+   V  L  K   K     R  LQ      ++FV   GG++F+  +FE+
Sbjct: 722 GVEPEKLIGFNSRLVATLDGKDAKK-----RQKLQYESSKSIDFVLNKGGWIFNMQHFEQ 776

Query: 232 LNAP 243
           L  P
Sbjct: 777 LKPP 780


>UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1; n=1;
            Apis mellifera|Rep: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1 - Apis
            mellifera
          Length = 3360

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +1

Query: 52   GKNLNQVVGFSEHSVVLLGEKKQ---TKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTN 222
            GK    +V + + +V    + K+   T  ++     +    D C +F   +GG  FSS N
Sbjct: 3236 GKPQKNIVAYDQDNVYTFADSKKKPLTGSTDMKSNLVPAIKDVCADFAVFSGGAAFSSNN 3295

Query: 223  FEKLNAPQQK 252
            F    + Q+K
Sbjct: 3296 FLDAKSNQKK 3305


>UniRef50_Q98RP0 Cluster: Putative uncharacterized protein orf467;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf467 - Guillardia theta (Cryptomonas phi)
          Length = 467

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 49  GGKNLNQVVGFSEHSVVLLGEKKQTKDSETLRGTLQKT---DDSCVNF 183
           G  N NQ +GFS+  +VLL  K + K +     T ++    ++SC+NF
Sbjct: 207 GASNENQEIGFSKRLLVLLENKSEVKFNLINTSTKKEDIYFENSCINF 254


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,715,100
Number of Sequences: 1657284
Number of extensions: 8288928
Number of successful extensions: 21175
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21170
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)