Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1240
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    41   0.001
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    41   0.001
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    41   0.001
AY061434-1|AAL28982.1|  753|Drosophila melanogaster LD36177p pro...    31   0.75 
AE014134-3526|AAG22124.2|  753|Drosophila melanogaster CG1512-PB...    31   0.75 
AE014134-3525|AAF57224.3|  753|Drosophila melanogaster CG1512-PA...    31   0.75 

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 67   QVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQ 246
            +++GF+   V  +  K   K     R  LQ  +D  ++FV   GG+VF++ NFEKL A  
Sbjct: 3242 KLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASD 3296

Query: 247  QK 252
            QK
Sbjct: 3297 QK 3298


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 67   QVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQ 246
            +++GF+   V  +  K   K     R  LQ  +D  ++FV   GG+VF++ NFEKL A  
Sbjct: 965  KLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASD 1019

Query: 247  QK 252
            QK
Sbjct: 1020 QK 1021


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 67   QVVGFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQ 246
            +++GF+   V  +  K   K     R  LQ  +D  ++FV   GG+VF++ NFEKL A  
Sbjct: 3242 KLIGFNSRLVATVDGKDSKK-----RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASD 3296

Query: 247  QK 252
            QK
Sbjct: 3297 QK 3298


>AY061434-1|AAL28982.1|  753|Drosophila melanogaster LD36177p
           protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 389 RRVFLILVYADRANPKRIHVGAGTELRQLLAEELVRDRVGGRLDEC 252
           + V  IL Y  R   K +HV +  +LR+   E+ + DR+G    EC
Sbjct: 249 QEVIRILEYESRRAQKFLHVSSLPKLRKECEEKFINDRLGFIYSEC 294


>AE014134-3526|AAG22124.2|  753|Drosophila melanogaster CG1512-PB,
           isoform B protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 389 RRVFLILVYADRANPKRIHVGAGTELRQLLAEELVRDRVGGRLDEC 252
           + V  IL Y  R   K +HV +  +LR+   E+ + DR+G    EC
Sbjct: 249 QEVIRILEYESRRAQKFLHVSSLPKLRKECEEKFINDRLGFIYSEC 294


>AE014134-3525|AAF57224.3|  753|Drosophila melanogaster CG1512-PA,
           isoform A protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 389 RRVFLILVYADRANPKRIHVGAGTELRQLLAEELVRDRVGGRLDEC 252
           + V  IL Y  R   K +HV +  +LR+   E+ + DR+G    EC
Sbjct: 249 QEVIRILEYESRRAQKFLHVSSLPKLRKECEEKFINDRLGFIYSEC 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,769,988
Number of Sequences: 53049
Number of extensions: 395552
Number of successful extensions: 1098
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)