BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1239 (435 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4UMG6 Cluster: Permeases of the major facilitator supe... 33 3.5 UniRef50_Q05353 Cluster: 3,4-dihydroxyphenylacetate 2,3-dioxygen... 32 6.0 >UniRef50_Q4UMG6 Cluster: Permeases of the major facilitator superfamily; n=1; Rickettsia felis|Rep: Permeases of the major facilitator superfamily - Rickettsia felis (Rickettsia azadi) Length = 397 Score = 32.7 bits (71), Expect = 3.5 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 269 VLTNISTGNEII-MNLHEELDLIYPKTTVSIHDPPFSVFKRSTITVLFFFFLSFYIVLI 96 +L NI+T + + + L + I T VSI F +FKR T T L + F S +I ++ Sbjct: 294 LLNNITTSSSLSKIQLLLVMTSITTSTAVSILYKNFPIFKRFTFTTLIYAFSSIFIYVV 352 >UniRef50_Q05353 Cluster: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; n=94; Proteobacteria|Rep: 3,4-dihydroxyphenylacetate 2,3-dioxygenase - Escherichia coli Length = 276 Score = 31.9 bits (69), Expect = 6.0 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +3 Query: 135 NSYSRSFEYGK---WRIVNRDRRFWIYQIQFFMQIHDYFVSRGNVGENLLPCL 284 N S EYG R +N D+RF + I F +HD+ SR +GE ++ + Sbjct: 117 NIPSLKLEYGSVVPMRYMNEDKRFKVVSISAFCTVHDFADSR-KLGERIVKAI 168 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 386,772,746 Number of Sequences: 1657284 Number of extensions: 7162931 Number of successful extensions: 16643 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 16137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16621 length of database: 575,637,011 effective HSP length: 93 effective length of database: 421,509,599 effective search space used: 21496989549 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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