Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1239
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   1.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    20   8.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   8.9  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    20   8.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    20   8.9  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/30 (23%), Positives = 21/30 (70%)
 Frame = +3

Query: 165 KWRIVNRDRRFWIYQIQFFMQIHDYFVSRG 254
           ++++ + ++R  +Y+  F +++H+  +SRG
Sbjct: 72  RYKLNDLEKRREVYESIFKVEVHEALMSRG 101


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/30 (23%), Positives = 21/30 (70%)
 Frame = +3

Query: 165 KWRIVNRDRRFWIYQIQFFMQIHDYFVSRG 254
           ++++ + ++R  +Y+  F +++H+  +SRG
Sbjct: 232 RYKLNDLEKRREVYESIFKVEVHEALMSRG 261


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/30 (23%), Positives = 21/30 (70%)
 Frame = +3

Query: 165 KWRIVNRDRRFWIYQIQFFMQIHDYFVSRG 254
           ++++ + ++R  +Y+  F +++H+  +SRG
Sbjct: 232 RYKLNDLEKRREVYESIFKVEVHEALMSRG 261


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 235 IISFPVEMLVRTYCRA*GSRVCVPTGKS 318
           ++ F V  L   YC+A    VC    KS
Sbjct: 7   LLFFAVATLFAAYCKAESKVVCYYDSKS 34


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 309 GRHAHTGALSTAISS 265
           G+H H GA  +A SS
Sbjct: 73  GQHHHNGAAVSAASS 87


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 309 GRHAHTGALSTAISS 265
           G+H H GA  +A SS
Sbjct: 132 GQHHHNGAAVSAASS 146


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 309 GRHAHTGALSTAISS 265
           G+H H GA  +A SS
Sbjct: 73  GQHHHNGAAVSAASS 87


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 309 GRHAHTGALSTAISS 265
           G+H H GA  +A SS
Sbjct: 132 GQHHHNGAAVSAASS 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,178
Number of Sequences: 336
Number of extensions: 1800
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)