BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1239
(435 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L76433-1|AAC27659.1| 392|Anopheles gambiae tryptophan oxygenase... 28 0.13
L76432-1|AAC27663.1| 392|Anopheles gambiae tryptophan oxygenase... 28 0.13
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 24 2.0
EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein A... 22 8.2
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 22 8.2
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 8.2
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 22 8.2
>L76433-1|AAC27659.1| 392|Anopheles gambiae tryptophan oxygenase
protein.
Length = 392
Score = 28.3 bits (60), Expect = 0.13
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 165 KWRIVNRDRRFWIYQIQFFMQIHDYFVSRG 254
++R+++ D+R +Y+ F Q+HD V+RG
Sbjct: 236 EYRLMDIDKRREVYKSIFDAQVHDALVARG 265
>L76432-1|AAC27663.1| 392|Anopheles gambiae tryptophan oxygenase
protein.
Length = 392
Score = 28.3 bits (60), Expect = 0.13
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 165 KWRIVNRDRRFWIYQIQFFMQIHDYFVSRG 254
++R+++ D+R +Y+ F Q+HD V+RG
Sbjct: 236 EYRLMDIDKRREVYKSIFDAQVHDALVARG 265
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 24.2 bits (50), Expect = 2.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 269 VLTNISTGNEIIMNLHEELDLIYPKTTVSIHDPPFSVF 156
+L +S GN + E L+ PKT S+H F F
Sbjct: 181 MLWRVSRGNIFLRQATLEESLVDPKTGDSVHKIVFVAF 218
>EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein AA
protein.
Length = 62
Score = 22.2 bits (45), Expect = 8.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 306 RHAHTGALSTAISSHQHFHGKRNNHE 229
R +GA S+ S H H ++ NH+
Sbjct: 12 RRPGSGASSSQRSPFHHHHQQQQNHQ 37
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 22.2 bits (45), Expect = 8.2
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -1
Query: 315 FSGRHAHTGALSTAISSHQHFHGKRNNHE 229
F G AHT + I H +R H+
Sbjct: 28 FEGHRAHTVFVGVHIPGSSRRHSQRRRHK 56
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 22.2 bits (45), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 310 RSARTHGSPKHGNKFSPTFP 251
+SA TH SP + SP+ P
Sbjct: 737 KSASTHPSPHPATRASPSSP 756
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 22.2 bits (45), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 162 GKWRIVNRDRRFWIYQIQFFMQIHDYFVSRGNV 260
G R+VN+DRR + F +H ++R NV
Sbjct: 219 GPDRVVNKDRRG-----ELFYYMHQQLIARYNV 246
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,800
Number of Sequences: 2352
Number of extensions: 7634
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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