BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1238 (308 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI0000E49D8F Cluster: PREDICTED: similar to scavenger ... 31 5.0 UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=... 31 6.6 UniRef50_Q94AS9 Cluster: Cyclic nucleotide-gated ion channel 4; ... 31 6.6 >UniRef50_UPI0000E49D8F Cluster: PREDICTED: similar to scavenger receptor cysteine-rich protein precursor; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to scavenger receptor cysteine-rich protein precursor - Strongylocentrotus purpuratus Length = 563 Score = 31.1 bits (67), Expect = 5.0 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 38 EQSDW*VHTCTHRDEIGCIGKYFSNIEYLRPKG*DVRCIRVKL 166 + W VH CTH+D+I + S + +L+ G + C+ V L Sbjct: 454 DSKGWGVHNCTHKDDIAIKCRNKSFLSWLQITGIVLGCVTVLL 496 >UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=2; Culicidae|Rep: Mixed-lineage leukemia protein, mll - Aedes aegypti (Yellowfever mosquito) Length = 2874 Score = 30.7 bits (66), Expect = 6.6 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = -3 Query: 168 HSLTRMHRTSYPLGLRYSIFEKYFPIHPISSRCVHVCTYQSLC 40 H L H +Y + Y I Y+ + + RC +VC+ +C Sbjct: 2525 HQLQNFHTPNYIYPIGYKIIRFYWSMRRPNKRCRYVCSIADVC 2567 >UniRef50_Q94AS9 Cluster: Cyclic nucleotide-gated ion channel 4; n=4; core eudicotyledons|Rep: Cyclic nucleotide-gated ion channel 4 - Arabidopsis thaliana (Mouse-ear cress) Length = 694 Score = 30.7 bits (66), Expect = 6.6 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = -1 Query: 140 LIL*ALGIRYLKNIFLYTLSRLDVCMCVLTN 48 L++ A G+ ++ +FLYTLS D CMC+L + Sbjct: 95 LLVCATGL-FVDPLFLYTLSVSDTCMCLLVD 124 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 308,178,544 Number of Sequences: 1657284 Number of extensions: 5814136 Number of successful extensions: 11071 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11069 length of database: 575,637,011 effective HSP length: 79 effective length of database: 444,711,575 effective search space used: 10228366225 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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