SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1238
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   3.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   5.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   5.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    20   5.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   6.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   6.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   6.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    19   9.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   9.0  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 284 GLIFIIVCYSSPWKSIVNIC*VRYFIRKI 198
           GL F I   +  WK+ VN C V    RK+
Sbjct: 77  GLAFDIERQTCDWKTKVNNCDVIEKPRKV 105


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 103 IFSYTPYLVSMCACVYLPIALFGAFL 26
           +F Y   LV    C+    AL GAFL
Sbjct: 240 LFGYQIILVIFDCCLETVSALNGAFL 265


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 287 AGLIFIIVCYSSPWKSIVNIC*VRYFIRKI 198
           AGL F I   +  WK  V  C ++   RK+
Sbjct: 77  AGLYFDIDKQTCDWKDSVKNCKLKNKERKV 106


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 212 NTVLNKCSRLTSTVRNN 262
           NT    C+R++STV  N
Sbjct: 35  NTDEETCTRISSTVSRN 51


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 61  VYLPIALFGAFLR*LICL 8
           VY    +FGAF+  L C+
Sbjct: 69  VYAVYNIFGAFVMGLFCI 86


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
           +I+ +LG   L  +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
           +I+ +LG   L  +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
           +I+ +LG   L  +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 287 AGLIFIIVCYSSPWKSIVNIC 225
           +GL F I   +  WK  VN C
Sbjct: 69  SGLAFDIDKQTCDWKGKVNNC 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 59   HTCTHRDEIGCIGKYFSNIEYLRPK 133
            H C  + ++ C+G+     +Y  PK
Sbjct: 1245 HMCDWKYKVKCVGRKQLAQKYQLPK 1269



 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 193  VPIFLMKYRTQQMFTIDFHGE 255
            VP+         + T DFHG+
Sbjct: 1575 VPVLAQNLDWVAVMTYDFHGQ 1595


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 88  PYLVSMCACV 59
           PY+VS+  CV
Sbjct: 511 PYIVSLIGCV 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,553
Number of Sequences: 336
Number of extensions: 1527
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)

- SilkBase 1999-2023 -