Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1238
(308 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 3.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 3.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 20 5.2
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 20 5.2
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 20 5.2
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 20 6.8
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 20 6.8
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 20 6.8
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 19 9.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 19 9.0
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 19 9.0
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.6 bits (41), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 284 GLIFIIVCYSSPWKSIVNIC*VRYFIRKI 198
GL F I + WK+ VN C V RK+
Sbjct: 77 GLAFDIERQTCDWKTKVNNCDVIEKPRKV 105
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 3.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 103 IFSYTPYLVSMCACVYLPIALFGAFL 26
+F Y LV C+ AL GAFL
Sbjct: 240 LFGYQIILVIFDCCLETVSALNGAFL 265
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.2 bits (40), Expect = 5.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 287 AGLIFIIVCYSSPWKSIVNIC*VRYFIRKI 198
AGL F I + WK V C ++ RK+
Sbjct: 77 AGLYFDIDKQTCDWKDSVKNCKLKNKERKV 106
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 212 NTVLNKCSRLTSTVRNN 262
NT C+R++STV N
Sbjct: 35 NTDEETCTRISSTVSRN 51
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 20.2 bits (40), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 61 VYLPIALFGAFLR*LICL 8
VY +FGAF+ L C+
Sbjct: 69 VYAVYNIFGAFVMGLFCI 86
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
+I+ +LG L +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
+I+ +LG L +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 19.8 bits (39), Expect = 6.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 140 LIL*ALGIRYLKNIFLYTLSRL 75
+I+ +LG L +FL TLS L
Sbjct: 129 IIIISLGCLILAVVFLLTLSAL 150
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 19.4 bits (38), Expect = 9.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 287 AGLIFIIVCYSSPWKSIVNIC 225
+GL F I + WK VN C
Sbjct: 69 SGLAFDIDKQTCDWKGKVNNC 89
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 19.4 bits (38), Expect = 9.0
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +2
Query: 59 HTCTHRDEIGCIGKYFSNIEYLRPK 133
H C + ++ C+G+ +Y PK
Sbjct: 1245 HMCDWKYKVKCVGRKQLAQKYQLPK 1269
Score = 19.4 bits (38), Expect = 9.0
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +1
Query: 193 VPIFLMKYRTQQMFTIDFHGE 255
VP+ + T DFHG+
Sbjct: 1575 VPVLAQNLDWVAVMTYDFHGQ 1595
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 19.4 bits (38), Expect = 9.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 88 PYLVSMCACV 59
PY+VS+ CV
Sbjct: 511 PYIVSLIGCV 520
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,553
Number of Sequences: 336
Number of extensions: 1527
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5624413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -