Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1237
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    29   1.9  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   1.9  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   1.9  
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ...    29   1.9  
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ...    29   1.9  
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ...    29   1.9  
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ...    29   1.9  
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ...    29   1.9  

>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
           protein.
          Length = 10578

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
           protein.
          Length = 18519

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
           protein.
          Length = 18534

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform g protein.
          Length = 1769

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform f protein.
          Length = 1769

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform e protein.
          Length = 1769

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform d protein.
          Length = 1769

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
           protein 1, isoform c protein.
          Length = 1769

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 FNEVSTDNKFFEFEIRGINLNKLISNPIQHPNHEFE 44
           F+E  T N  F + I G+N+ KL  N +   + EFE
Sbjct: 730 FDENKTSNCQFNWTINGVNIEKLEENLVAVESTEFE 765


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,344,019
Number of Sequences: 27780
Number of extensions: 96852
Number of successful extensions: 221
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)