Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1236
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
 Frame = +3

Query: 510 YWLSRF----SIHTLFLVLSILKV 569
           YWL +      +HT+FLV ++L V
Sbjct: 108 YWLHQICHICELHTIFLVCNVLTV 131


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 510 YWLSRFSIHTLFLVLSIL 563
           +WLSR+S   +FLV  IL
Sbjct: 151 HWLSRYSWAKVFLVEHIL 168


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 510 YWLSRFSIHTLFLVLSIL 563
           +WLSR+S   +FLV  IL
Sbjct: 151 HWLSRYSWAKVFLVEHIL 168


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 427 LHVLYCVSVGFVSFHFLYI 371
           +H+L+C +  F + H L++
Sbjct: 178 MHLLFCCAFIFFNMHLLFL 196



 Score = 21.0 bits (42), Expect = 7.4
 Identities = 4/18 (22%), Positives = 13/18 (72%)
 Frame = -1

Query: 420 YCIVLV*VLYHFIFYIFL 367
           YC++++ +  ++ +Y F+
Sbjct: 229 YCVLIILLCIYYFYYAFI 246


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 126 FDLF*IINKNCQTRHPLKF 182
           FD    + +NCQ RHP  +
Sbjct: 423 FDPDRFLPENCQKRHPFAY 441


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 126 FDLF*IINKNCQTRHPLKF 182
           FD    + +NCQ RHP  +
Sbjct: 423 FDPDRFLPENCQKRHPFAY 441


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 207 TFFLIVMAFENK 242
           TFF+I++ F NK
Sbjct: 335 TFFIIIIQFNNK 346


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 198 FFGTFFLIVMAFEN 239
           FFG FF+I   F N
Sbjct: 8   FFGVFFIIFSDFVN 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,162
Number of Sequences: 336
Number of extensions: 2407
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)