Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1235
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   2.0  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   2.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   2.0  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   6.0  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       20   7.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   7.9  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 166 GTRREEHHLLRNRP 125
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 384 RTGCSSGATQQAHCRRYNAKSSPCHP 307
           + GCSS    Q  C + N   +  HP
Sbjct: 159 KKGCSSEEVFQFECPKVNETVAATHP 184


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 166 GTRREEHHLLRNRP 125
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 166 GTRREEHHLLRNRP 125
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 168 LDRGKAPPSGRD 203
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 168 LDRGKAPPSGRD 203
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 236 EMRHRAKRYPDPQ 274
           +M H  + YPDP+
Sbjct: 92  DMHHNPQVYPDPE 104


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 346 MSLLCRPRGTPSPA 387
           ++LLC  +G PSP+
Sbjct: 250 VALLCPAQGFPSPS 263


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -1

Query: 366 GATQQAHCRRYNAKSSPCH 310
           G T      R  A S+PCH
Sbjct: 176 GTTLSQSPNRRRASSNPCH 194


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 268 VRIPLCSVPHLLHKSPSVPYRPSRPDG 188
           +++P  +  H    SP++P+  +R DG
Sbjct: 117 MQLPHPAAAHSALLSPAMPHNLTRHDG 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,061
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)