Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1235
(402 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 135 7e-34
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 135 7e-34
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 135 7e-34
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 126 3e-31
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 1.8
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 3.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 3.2
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 4.2
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 23 5.5
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 5.5
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 22 7.3
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 135 bits (326), Expect = 7e-34
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 2e-17
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 135 bits (326), Expect = 7e-34
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 2e-17
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 135 bits (326), Expect = 7e-34
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 2e-17
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 126 bits (304), Expect = 3e-31
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.2 bits (189), Expect = 3e-17
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGI+TNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.2 bits (50), Expect = 1.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 177 GKAPPSGRDGRYGTEGLLCRR*GTEQRGILTLK 275
G+ P GRDG +G GL ++ G+ LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 3.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 64 FKMCDEEVAALVVDNGSGMC 123
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 3.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 392 Q*AGLGVPRGRHS 354
Q AG G PRGRHS
Sbjct: 1374 QPAGGGTPRGRHS 1386
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 183 PSHDRGEHGARSIISC 136
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 22.6 bits (46), Expect = 5.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 305 VSNDSVFDGVFEGQDTSLLCASSPT 231
V +D VFD + + S C S+PT
Sbjct: 222 VGDDRVFDNGVKYPEASCWCNSNPT 246
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 22.6 bits (46), Expect = 5.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 141 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTC 16
S TGLAH + RG +AH +L I++ + LTC
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC 201
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 22.2 bits (45), Expect = 7.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1
Query: 375 CSSGATQQAHCRRYNAKSSP 316
C + A ++ HC RY + P
Sbjct: 102 CRTRAGEKGHCTRYQSCKGP 121
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,880
Number of Sequences: 2352
Number of extensions: 11027
Number of successful extensions: 41
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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