Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1235
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 134 3e-32
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 134 3e-32
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 134 3e-32
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 134 3e-32
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 134 3e-32
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 134 3e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 134 3e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 134 3e-32
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 132 7e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 7e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 7e-32
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 131 2e-31
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 127 3e-30
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 95 1e-20
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 81 4e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 59 1e-09
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 47 4e-06
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 40 9e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.044
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.044
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.058
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.23
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 3.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 3.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 3.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 3.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 3.8
Z81062-9|CAB02941.1| 312|Caenorhabditis elegans Hypothetical pr... 27 6.7
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 26 8.8
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 26 8.8
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 26 8.8
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 26 8.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 3e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 132 bits (320), Expect = 7e-32
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 7e-32
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (320), Expect = 7e-32
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDM 317
+RGILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 131 bits (316), Expect = 2e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 97 VAPEEHPVLLTEAP 110
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 127 bits (307), Expect = 3e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 76 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 80.2 bits (189), Expect = 5e-16
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE ++P
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAP 98
Score = 33.1 bits (72), Expect = 0.077
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
+APEEHPVLLTEAP
Sbjct: 96 IAPEEHPVLLTEAP 109
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 95.5 bits (227), Expect = 1e-20
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 124 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 85
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 83 VAPEEHPVLLTEAP 96
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 80.6 bits (190), Expect = 4e-16
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIVTNWDDMEKIWH+TFYNE V+P
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 55
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 202 MVGMGQKDSYVGDEAQSK 255
MVGMGQKDSYVGDEAQSK
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 53 VAPEEHPVLLTEAP 66
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 58.8 bits (136), Expect = 1e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Score = 54.0 bits (124), Expect = 4e-08
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 255 RGILTLKYPIEHGIVTNWDDMEKIWHYTF 341
RG+ +++YP+EHGIV NW DMEKIW Y F
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIF 93
Score = 29.5 bits (63), Expect = 0.94
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
+ PEEHPVLLT+AP
Sbjct: 100 IFPEEHPVLLTDAP 113
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 243
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSPPR 371
++ R +L + YP+++GIV NWDDM +W +TF E P+
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPK 103
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 39.5 bits (88), Expect = 9e-04
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 267 TLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
T+KYPI HGIV +WD ME+ W + P
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEP 112
Score = 36.7 bits (81), Expect = 0.006
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.044
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHYTF 341
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.044
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHYTF 341
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.058
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -3
Query: 331 CQIFSMSSQLVTIPC-SMGYLRVRIPLCSVPHLLHKSPSVP-YRPSRPD 191
CQ+FS QLVT+ SMG +++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 124 KAGFAGDDAPRAVFPSIVGRPRHQG 198
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 174 RGKAPPSGRDGRYGTEG 224
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z81062-9|CAB02941.1| 312|Caenorhabditis elegans Hypothetical
protein F15A4.9 protein.
Length = 312
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 300 TNWDDMEKIWHYTFYNEPAV 359
T WD++ K+ +T++NE V
Sbjct: 52 TGWDNVTKVGQWTYFNESGV 71
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 272 EGQDTSLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 93
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 92 AAT 84
A++
Sbjct: 719 ASS 721
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 272 EGQDTSLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 93
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 92 AAT 84
A++
Sbjct: 719 ASS 721
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 272 EGQDTSLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 93
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 92 AAT 84
A++
Sbjct: 719 ASS 721
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 272 EGQDTSLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 93
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 563 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 622
Query: 92 AAT 84
A++
Sbjct: 623 ASS 625
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,206,553
Number of Sequences: 27780
Number of extensions: 226319
Number of successful extensions: 908
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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