Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1235
(402 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 110 3e-25
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 110 3e-25
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 110 3e-25
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 110 3e-25
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 110 3e-25
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 110 3e-25
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 106 6e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 106 6e-24
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 106 6e-24
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 102 8e-23
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 74 4e-14
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 68 2e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 4e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 5e-09
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 54 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 4e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 38 0.002
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.041
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.094
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 30 0.66
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 3.5
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 3.5
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 27 4.7
At5g45620.2 68418.m05607 26S proteasome regulatory subunit, puta... 27 6.2
At5g45620.1 68418.m05608 26S proteasome regulatory subunit, puta... 27 6.2
At4g19006.1 68417.m02801 26S proteasome regulatory subunit, puta... 27 6.2
At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase famil... 26 8.2
At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase famil... 26 8.2
At5g51050.1 68418.m06328 mitochondrial substrate carrier family ... 26 8.2
At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UD... 26 8.2
At3g50480.1 68416.m05521 broad-spectrum mildew resistance RPW8 f... 26 8.2
At3g48860.2 68416.m05337 expressed protein 26 8.2
At3g48860.1 68416.m05336 expressed protein 26 8.2
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 8.2
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 8.2
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 1e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP 100
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 98 VAPEEHPVLLTEAP 111
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 79.0 bits (186), Expect = 1e-15
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV+NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP 100
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 98 VAPEEHPVLLTEAP 111
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 1e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP 100
Score = 33.1 bits (72), Expect = 0.071
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHP+LLTEAP
Sbjct: 98 VAPEEHPILLTEAP 111
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 1e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP 100
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 98 VAPEEHPVLLTEAP 111
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 79.0 bits (186), Expect = 1e-15
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV+NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP 100
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 98 VAPEEHPVLLTEAP 111
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 78.6 bits (185), Expect = 1e-15
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHGIV NWDDMEKIWH+TFYNE V+P
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP 100
Score = 33.1 bits (72), Expect = 0.071
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHP+LLTEAP
Sbjct: 98 VAPEEHPILLTEAP 111
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 106 bits (254), Expect = 6e-24
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 2e-15
Identities = 30/38 (78%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHG+V+NWDDMEKIWH+TFYNE ++P
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAP 100
Score = 33.1 bits (72), Expect = 0.071
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
+APEEHPVLLTEAP
Sbjct: 98 IAPEEHPVLLTEAP 111
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 106 bits (254), Expect = 6e-24
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 2e-15
Identities = 30/38 (78%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHG+V+NWDDMEKIWH+TFYNE ++P
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAP 100
Score = 33.1 bits (72), Expect = 0.071
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
+APEEHPVLLTEAP
Sbjct: 98 IAPEEHPVLLTEAP 111
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 106 bits (254), Expect = 6e-24
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 78.2 bits (184), Expect = 2e-15
Identities = 30/38 (78%), Positives = 36/38 (94%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGILTLKYPIEHG+V+NWDDMEKIWH+TFYNE ++P
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAP 100
Score = 33.1 bits (72), Expect = 0.071
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
+APEEHPVLLTEAP
Sbjct: 98 IAPEEHPVLLTEAP 111
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 102 bits (245), Expect = 8e-23
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 75.4 bits (177), Expect = 1e-14
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+RGIL+LKYPIEHG+V+NWDDMEKIWH+TFYNE + P
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEP 101
Score = 29.9 bits (64), Expect = 0.66
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 365 PEEHPVLLTEAP 400
PEEHP+LLTEAP
Sbjct: 101 PEEHPILLTEAP 112
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 73.7 bits (173), Expect = 4e-14
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = +3
Query: 198 RDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
RDG E + G R ILTLK P+EHGIV NWDDMEKIWHYTFYNE V P
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDP 89
Score = 59.7 bits (138), Expect = 7e-10
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
Score = 31.1 bits (67), Expect = 0.29
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
V PEEHPVLLTEAP
Sbjct: 87 VDPEEHPVLLTEAP 100
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 68.1 bits (159), Expect = 2e-12
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +3
Query: 258 GILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
GILTL YP+EHG+V+NWDDMEKIW++TFY+E V+P
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAP 55
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 359 VAPEEHPVLLTEAP 400
VAPEEHPVLLTEAP
Sbjct: 53 VAPEEHPVLLTEAP 66
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 202 MVGMGQKDSYVGDEAQSK 255
MVGM + D +VGD+A+++
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 32.7 bits (71), Expect = 0.094
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+R + + P + GIVT+WD ++ +W + F N + P
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDP 116
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 5e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 31.1 bits (67), Expect = 0.29
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
PI+ GIV++WD ++ IW + F + + P
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDP 122
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 54.0 bits (124), Expect = 4e-08
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSP 365
+E R L + YP+ +GIV NWDDME +W + FYNE ++P
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 240
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 240
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 270 LKYPIEHGIVTNWDDMEKIWHYTFYN 347
L YPIEHG V +WD ME+ W +N
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFN 111
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.041
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 215 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 78
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.094
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 186
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 29.9 bits (64), Expect = 0.66
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHYTFY 344
PIE G++ +WD ME + Y Y
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVY 78
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 183
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSPPRN 374
L++KY + H I + W + +IW PP N
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVN 214
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHYTFYNEPAVSPPRN 374
L++KY + H I + W + +IW PP N
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVN 214
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 191 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 69
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 268 VRIPLCSVPHLLHKSPSVPYRPSRPDGGA 182
V +PLC + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 243 GTEQRGILTLKYPIEHGIVTNWDDMEKIWHY 335
GTE IL + + E GI+ W +W Y
Sbjct: 355 GTEHAHILRIPFRTEKGILRKWISRFDVWPY 385
>At5g45620.2 68418.m05607 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 350
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 325 IFSMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSV 215
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At5g45620.1 68418.m05608 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 386
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 325 IFSMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSV 215
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At4g19006.1 68417.m02801 26S proteasome regulatory subunit,
putative (RPN9) similar to 26S proteasome subunit p40.5
[Homo sapiens] gi|3618343|dbj|BAA33214
Length = 386
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 325 IFSMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSV 215
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSV 326
>At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 380
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 237 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 61
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 60 V 58
+
Sbjct: 78 L 78
>At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 352
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 237 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 61
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 60 V 58
+
Sbjct: 78 L 78
>At5g51050.1 68418.m06328 mitochondrial substrate carrier family
protein similar to peroxisomal Ca-dependent solute
carrier [Oryctolagus cuniculus] GI:2352427; contains
INTERPRO:IPR001993 Mitochondrial substrate carrier
family, INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 487
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 353 RLIVEGIMPNLLHVIPVSNDSVFDGVFEGQDTSL 252
R + +G++PNLL V+P + S+ V+E SL
Sbjct: 453 RALYKGLLPNLLKVVPAA--SITYMVYEAMKKSL 484
>At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative strong similarity to
sucrose synthase GI:6682841 from [Citrus unshiu]
Length = 809
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 243 GTEQRGILTLKYPIEHGIVTNWDDMEKIWHY 335
GTE IL + + E GI+ W +W Y
Sbjct: 358 GTEHTHILRVPFRSEKGILRKWISRFDVWPY 388
>At3g50480.1 68416.m05521 broad-spectrum mildew resistance RPW8
family protein contains Pfam PF05659: Arabidopsis
broad-spectrum mildew resistance protein RPW8
Length = 200
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 329 PNLLHVIPVSNDSVFDGVFEGQDTSLLCASSPT*ESFCPI 210
P + + V ++DG +G+DTS++ T ES P+
Sbjct: 15 PLIAAALGVGAQVIYDGFRKGKDTSIINRLGRTMESISPV 54
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 170 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 72
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 170 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 72
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 191 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 105
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 204
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,733,089
Number of Sequences: 28952
Number of extensions: 218152
Number of successful extensions: 659
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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