Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1234
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   4.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   4.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 375 WTSSEPIWVLGGYW 334
           WTS E I  L G+W
Sbjct: 294 WTSKEKISFLRGFW 307


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 358 YLGVRWLLEPIDIYDVNAPPT 296
           + G  W L+    +DV AP T
Sbjct: 248 FYGHSWYLQSTSNHDVGAPAT 268


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 157 LVVGLCESAWVGT 195
           L++G C S +VGT
Sbjct: 78  LLIGFCASIYVGT 90


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 346 RWLLEPID 323
           RW+LEP D
Sbjct: 700 RWILEPTD 707


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,214
Number of Sequences: 336
Number of extensions: 2264
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)