Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1233
(425 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 165 1e-41
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 165 2e-41
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 165 2e-41
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 156 6e-39
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 108 2e-24
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 108 2e-24
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 107 5e-24
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 105 1e-23
03_01_0034 + 318432-318825,318902-319851 105 1e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 105 1e-23
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 88 2e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 83 7e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 74 6e-14
10_08_1017 - 22268957-22269279,22269784-22269934,22270084-222701... 29 1.6
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 1.6
09_01_0013 - 355103-355435 29 1.6
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 29 1.6
12_02_0399 - 18600444-18600591,18600626-18601656 28 2.7
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 2.7
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 28 3.6
06_03_1090 - 27531805-27531989,27532137-27532395 28 3.6
01_03_0152 + 13248027-13248419 28 3.6
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 27 4.8
06_03_0735 - 23987349-23989196 27 4.8
02_01_0434 + 3158637-3159319,3159460-3159576,3160064-3160226,316... 27 4.8
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 27 6.3
10_08_0187 + 15592130-15592512,15592597-15592972 27 8.3
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 27 8.3
04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712... 27 8.3
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 165 bits (401), Expect = 1e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 165 bits (400), Expect = 2e-41
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYN
Sbjct: 151 SLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 165 bits (400), Expect = 2e-41
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 156 bits (379), Expect = 6e-39
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G+E+VDL LDR+RK
Sbjct: 125 ALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRK 184
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 185 LADNCTGLQGFLVFNAVGGGTGSGL 209
Score = 48.4 bits (110), Expect = 2e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQ 335
SLL+ERLSVDYG+KSKL F IYP+PQ
Sbjct: 211 SLLLERLSVDYGRKSKLGFTIYPSPQ 236
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 108 bits (260), Expect = 2e-24
Identities = 47/85 (55%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 243 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 302
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 303 EAENCDCLQGFQVCHSLGGGTGSGM 327
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 329 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 364
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 108 bits (260), Expect = 2e-24
Identities = 47/85 (55%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 107 bits (256), Expect = 5e-24
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 105 bits (252), Expect = 1e-23
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 105 bits (252), Expect = 1e-23
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 105 bits (252), Expect = 1e-23
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 88.2 bits (209), Expect = 2e-18
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 21/106 (19%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQ---------------------GFLIFHSFGGGTGSGL 255
A+ C LQ GF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGM 168
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 170 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 205
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 83.4 bits (197), Expect = 7e-17
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 16/101 (15%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 181 LADQCTGLQ----------------GFLIFHSFGGGTGSGL 255
A+ C LQ GF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGM 163
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 165 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 200
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 73.7 bits (173), Expect = 6e-14
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 174
A+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D I
Sbjct: 64 ALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMI 122
Query: 175 RKLADQCTGLQGFLIFHSFGGGTGSGLLPY 264
+ AD L+GF++ HS GGTGSG+ Y
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYN 365
S L+E L+ Y KK ++++P + S VV+PYN
Sbjct: 151 SYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYN 187
>10_08_1017 -
22268957-22269279,22269784-22269934,22270084-22270164,
22271296-22271374,22273296-22273345
Length = 227
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 390 GCVGGENRSCRARRRQWKPEARGRWRTPV 304
G V GE S R RR E RGRWR V
Sbjct: 169 GGVEGEGDSRRGRREALAGEGRGRWRLVV 197
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 66 VSSRTTYYW*GRCGQQLCPWSLHHWK 143
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>09_01_0013 - 355103-355435
Length = 110
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 390 GCVGGENRSCRARRRQWKPEARGRWR 313
G GG RA R +W+P+ R RWR
Sbjct: 27 GARGGAAGGRRAWRPRWRPQRRPRWR 52
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL-IFHSFGGGTGSGLL 258
AA G Y + ++ L + + +LA +C GL+ FL + ++ GG GL+
Sbjct: 125 AATTNFYGRYDVSLDVNVLGVKHLCQLAKKCRGLKVFLHVSTAYAGGEQEGLI 177
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 66 VSSRTTYYW*GRCGQQLCPWSLHHWK 143
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 2.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 139 QWCSDHGHSCWPHLP 95
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 253 TQSRYLHRRSGRSGILADRYTGQRACGFCPK-PNLRFPF 140
T + LH + RSG ADR+T C K P PF
Sbjct: 301 TLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPF 339
>06_03_1090 - 27531805-27531989,27532137-27532395
Length = 147
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = -3
Query: 381 GGENRSCRARRR-----QWKPEARGRWRTPV*TSCRSQR 280
GG+NR RR +W+ EAR R R PV T+ R R
Sbjct: 34 GGDNRVGGRRRPVGGGGRWREEARARRRLPVTTTVRMAR 72
>01_03_0152 + 13248027-13248419
Length = 130
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 411 AQSRVLKGCVGG-ENRSCRARRRQWKPEARGRW 316
A V K C+GG +R RRR + RGRW
Sbjct: 29 AMGAVEKWCIGGWGSRGGTTRRRPTRSRRRGRW 61
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 356 LDDGSGNLRRGVDGELQFRLLAVVNGET 273
+DDGSG + G GE + VNGET
Sbjct: 889 IDDGSGTMCAGSTGEKALSVHLRVNGET 916
>06_03_0735 - 23987349-23989196
Length = 615
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 238 LHRRSGRSGILADRYTGQRACGF 170
LH R+ R+G+LADRY F
Sbjct: 60 LHGRAARAGLLADRYLANALLAF 82
>02_01_0434 +
3158637-3159319,3159460-3159576,3160064-3160226,
3160394-3160600
Length = 389
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 323 PRASGFHCRRRALQLLFSPPTQP 391
P A+ FHC RR L F+PP P
Sbjct: 8 PSAAPFHCSRR--HLFFAPPPPP 28
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 201 SARIPDLPLLRWRYR-LWVTSLLMERL 278
S + D+PL RWR R +V S MER+
Sbjct: 156 SDQYQDMPLFRWRLRHTYVDSTFMERV 182
>10_08_0187 + 15592130-15592512,15592597-15592972
Length = 252
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 260 GSNPEPVPPPKEWKIRNPC 204
G +P P PPP + K+R C
Sbjct: 17 GPSPPPPPPPAQLKVRRLC 35
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 329 ASGFHCRRRALQLLFSPPTQPLSTLDC 409
A G H RR L L SPPT P S+L C
Sbjct: 19 APGPH-RRPGLALRPSPPTPPSSSLSC 44
>04_03_0684 -
18670697-18670933,18671003-18671102,18671214-18671266,
18671664-18671810,18671901-18672031,18673064-18673088,
18673201-18673305,18673941-18674054,18674900-18674992,
18675101-18675193,18675951-18676057,18676442-18676490,
18677140-18677253,18677728-18677787,18677887-18677955,
18679154-18679255,18679338-18679366,18679450-18679732,
18680399-18680752
Length = 754
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 300 TSCRSQRRDAPSIRK*PRAGTSTEGVE-DQESLQTGTLVS 184
TS RSQ+ A R R TS +GV+ D ++ TGT V+
Sbjct: 501 TSDRSQKSRAIFARDATRGATSDQGVQPDADTENTGTSVA 540
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,387
Number of Sequences: 37544
Number of extensions: 296057
Number of successful extensions: 1066
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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