Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1233
(425 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 181 3e-46
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 180 3e-46
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 180 4e-46
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 178 1e-45
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 3e-45
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 7e-44
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 9e-44
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 2e-43
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 7e-40
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 2e-39
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 155 1e-38
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 129 8e-31
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 106 7e-24
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 106 9e-24
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 106 9e-24
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 3e-23
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 103 8e-23
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 1e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 89 2e-18
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 77 8e-15
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 5e-13
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 56 1e-08
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 48 4e-06
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 43 1e-04
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 31 0.40
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 1.2
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 2.8
SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4) 28 3.7
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 28 3.7
SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 27 8.6
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 181 bits (440), Expect = 3e-46
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 129 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 188
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 189 LADQCTGLQGFLIFHSFGGGTGSG 212
Score = 179 bits (436), Expect = 8e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRK
Sbjct: 650 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 709
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 710 LADQCTGLQGFLIFHSFGGGTGSG 733
Score = 77.0 bits (181), Expect = 6e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN
Sbjct: 735 SSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 771
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 214 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 250
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 180 bits (439), Expect = 3e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVDLVLDRIRK
Sbjct: 498 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRK 557
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 558 LADQCTGLQGFLIFHSFGGGTGSG 581
Score = 180 bits (438), Expect = 4e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSG 148
Score = 77.0 bits (181), Expect = 6e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN
Sbjct: 150 SSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 186
Score = 77.0 bits (181), Expect = 6e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN
Sbjct: 583 SSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 619
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 180 bits (438), Expect = 4e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRK
Sbjct: 64 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 123
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 124 LADQCTGLQGFLIFHSFGGGTGSG 147
Score = 78.6 bits (185), Expect = 2e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN
Sbjct: 149 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 185
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 178 bits (434), Expect = 1e-45
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDR RK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSG 148
Score = 76.2 bits (179), Expect = 1e-14
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 186
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 177 bits (431), Expect = 3e-45
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRK
Sbjct: 869 AVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRK 928
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 929 LADQCTGLQGFLIFHSFGGGTGSG 952
Score = 172 bits (419), Expect = 9e-44
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLDR+RK
Sbjct: 436 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRK 495
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFLIFHSFGGGTGSG
Sbjct: 496 LADGCTGLQGFLIFHSFGGGTGSG 519
Score = 78.2 bits (184), Expect = 3e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 954 TSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 990
Score = 74.5 bits (175), Expect = 3e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEFAIYPAP +S+AVVEPYN
Sbjct: 521 TSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYN 557
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 173 bits (420), Expect = 7e-44
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++VLDR+RK
Sbjct: 50 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 110 LADQCTGLQGFLIFHSFGGGTGSG 133
Score = 169 bits (410), Expect = 1e-42
Identities = 74/84 (88%), Positives = 82/84 (97%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D VLDRIRK
Sbjct: 483 AVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRK 542
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQC+GLQGFL+FHSFGGGTGSG
Sbjct: 543 LADQCSGLQGFLVFHSFGGGTGSG 566
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 135 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 171
Score = 74.1 bits (174), Expect = 4e-14
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
++LL+ERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 568 SALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 604
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 172 bits (419), Expect = 9e-44
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRK
Sbjct: 30 AVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 89
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 90 LADQCTGLQGFLIFHSFGGGTGSG 113
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFA+YPAPQ+STAVVEPYN
Sbjct: 115 SSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYN 151
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 171 bits (416), Expect = 2e-43
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D VLDR+RK
Sbjct: 65 AVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRK 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFLIFHSFGGGTGSG
Sbjct: 125 LADGCTGLQGFLIFHSFGGGTGSG 148
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 150 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 186
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 159 bits (387), Expect = 7e-40
Identities = 69/84 (82%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++V+D+IRK
Sbjct: 976 AVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRK 1035
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
+ DQC+GLQGFLIFHSFGGGTGSG
Sbjct: 1036 MTDQCSGLQGFLIFHSFGGGTGSG 1059
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SL+ E LSVDYGKKSKLEFA+YPAP +STAVVEPYN
Sbjct: 1062 SLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYN 1097
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 158 bits (384), Expect = 2e-39
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 207
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 208 GFLIFHSFGGGTGSG 252
GFLIFHSFGGGTGSG
Sbjct: 71 GFLIFHSFGGGTGSG 85
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 87 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 123
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 155 bits (377), Expect = 1e-38
Identities = 69/72 (95%), Positives = 72/72 (100%)
Frame = +1
Query: 37 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 216
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 217 IFHSFGGGTGSG 252
IFHSFGGGTGSG
Sbjct: 62 IFHSFGGGTGSG 73
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 75 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 111
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 149 bits (361), Expect = 1e-36
Identities = 65/72 (90%), Positives = 70/72 (97%)
Frame = +1
Query: 37 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 216
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 217 IFHSFGGGTGSG 252
IFHSFGGGTGSG
Sbjct: 62 IFHSFGGGTGSG 73
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFA+YPAPQ+STAVVEPYN
Sbjct: 75 SSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYN 111
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 129 bits (312), Expect = 8e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD VLDR+RK
Sbjct: 65 AVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRK 114
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LADQC+GLQGF IFHSFGGGTGSG
Sbjct: 115 LADQCSGLQGFFIFHSFGGGTGSG 138
Score = 71.3 bits (167), Expect = 3e-13
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFA+YPAP +++AVVEPYN
Sbjct: 140 SSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYN 176
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 106 bits (255), Expect = 7e-24
Identities = 47/85 (55%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 276 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 335
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 336 EAESCDCLQGFQLTHSLGGGTGSGM 360
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 362 TLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 397
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 106 bits (254), Expect = 9e-24
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAESCDCLQGFQLTHSLGGGTGSGM 147
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 106 bits (254), Expect = 9e-24
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 8 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 67
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGLL 258
A+ C +QGF + HS GGGTGSG++
Sbjct: 68 EAESCDCIQGFQLTHSLGGGTGSGMV 93
Score = 34.3 bits (75), Expect = 0.043
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 252 VTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+ +LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 92 MVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 129
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 3e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 37 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 183
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 103 bits (246), Expect = 8e-23
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 SVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C +QGF + HS GGGTGSG+
Sbjct: 123 EAESCDCIQGFQLTHSLGGGTGSGM 147
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F+I P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYN 184
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 1e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 37 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 183
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D + D +RK
Sbjct: 19 SILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRK 78
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C +QG + + GGGTGSGL
Sbjct: 79 EAENCDCMQGVQLIQALGGGTGSGL 103
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGKKSKLEFAIYPAPQ+STAVVEPYN
Sbjct: 25 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 61
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 184 ADQCTGLQGFLIFHSFGGGTGSG 252
ADQCTGLQGFLIFHSFGGGTGSG
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSG 23
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 74.9 bits (176), Expect = 2e-14
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSVDYGK+SKLEFA+YPAPQ+STAVVEPYN
Sbjct: 281 SSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYN 317
Score = 55.6 bits (128), Expect = 2e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +1
Query: 178 KLADQCTGLQGFLIFHSFGGGTGSG 252
K ADQCTGLQGFL+FHSFGGGTGSG
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSG 279
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 5e-13
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +1
Query: 94 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I HS GGGTGSGL
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGL 55
Score = 33.9 bits (74), Expect = 0.057
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLL+ ++ +Y + F + P+P VS V EPYN
Sbjct: 57 SLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYN 92
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 56.0 bits (129), Expect = 1e-08
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 AVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 165
AV +D+E V+ + ++GT+R + Q + K + NN+A G G + +D VL
Sbjct: 68 AVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVL 125
Query: 166 DRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
D +++ ++C L GFL S GGTGSG+
Sbjct: 126 DLVQREVEKCDRLDGFLTLLSLAGGTGSGV 155
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 VFVDLEPTVVDEVRT--GTYRQLFHPEQLITGKEDAANNYARGHY--TI---GKEIVDLV 162
V VD E V+ R G + Q +I G+ NN+A G++ +I G ++ +
Sbjct: 42 VCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMT 100
Query: 163 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
+D +RK ++C G ++ HS GGTGSGL
Sbjct: 101 MDAMRKEVERCDSFAGTIVMHSLTGGTGSGL 131
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 172 IRKLADQCTGLQGFLIFHSFGGGTGSGL 255
+RK A+ C +QGF + HS GGGTGSGL
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGL 28
Score = 33.1 bits (72), Expect = 0.099
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+L++ L +Y + +++P+P+VS VVEPYN
Sbjct: 30 TLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYN 65
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 35.9 bits (79), Expect = 0.014
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLI 87
A+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 117
AV +D+E VV+ + G +F +QLIT NN+
Sbjct: 77 AVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 286 STERRSINKEVTQSRYLHRRSGRSGILADRYTGQRACGFCPKPNLRFPF 140
+T R + + RY H + +T +R C F P N+ FPF
Sbjct: 412 NTSRYGHDHDTNTLRYGHEHDTNTSRYEHEHTTKRMCSFRPGSNVVFPF 460
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -1
Query: 359 GLDDGSGNLRRGVDGELQFRLLAVVN---GETLHQ*GSNPEPVPPPKEWKIRNPCRPVHW 189
G+DD G+ D EL+ +L + G +L + P +PP + ++ P P+H
Sbjct: 1291 GIDDQMGSR---FDPELESKLPFTSSKPFGLSLRKANGRPPELPPKAKSGVKTPTSPLHR 1347
Query: 188 SASLRILSKT 159
S+S ++ T
Sbjct: 1348 SSSWSVVRST 1357
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 39 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 149
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 39 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 149
G HW+ T + + +W G G + W HW N
Sbjct: 258 GKHWYGNTGMETLGQKHWYGNTGMKTLVWK--HWDKN 292
>SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4)
Length = 507
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 123 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 248
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 142 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 186
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 3.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 10 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 189
V +E TV DE G YR E ITGK + + YTI K ++ + ++ D
Sbjct: 39 VRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDKGDKHTLVIKSIEVKD 94
Query: 190 ----QCTGLQGFLIFHSF 231
+C G + +FH F
Sbjct: 95 GGYYKCKGAKTSKLFHLF 112
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 123 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 248
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 763 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 807
>SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1642
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 280 ERRSINKEVTQSRYLHRRSGRSGILADRYTGQRA 179
ERR + K V + RYLH R + GI + R+ Q A
Sbjct: 890 ERRELIKRVLR-RYLHMRKYKDGIWSTRHHSQLA 922
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 350 DGSGNLRRGVDGELQFRLLAVVNGETLHQ*GSNPEPVPPPK 228
DG + VD +L+ R +A+ + + P P PPP+
Sbjct: 79 DGGATSTKTVDSDLRARAIAMEALKAANAQAKEPVPYPPPQ 119
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +1
Query: 43 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 222
+ T+ + HP Q + K + +NY +G + D + + D G G++
Sbjct: 1060 KLNTHPAIGHPSQAVKTKGASVSNYMPDGGYMGNPMAD-SMGGMDNDYDDYMGEGGYMPM 1118
Query: 223 HSFGGGTGSG 252
H GG G G
Sbjct: 1119 HGGMGGMGMG 1128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,658,784
Number of Sequences: 59808
Number of extensions: 294080
Number of successful extensions: 831
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 814166562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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