Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1233
         (425 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    60   4e-11
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    60   4e-11
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    60   4e-11
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    60   4e-11
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    23   3.4  
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   6.0  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    22   7.9  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 59.7 bits (138), Expect = 4e-11
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +1

Query: 127 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
           HYT G E+VD VLD +RK  + C  LQGF + HS GGGTGSG+
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
           +LL+ ++  +Y  +    +++ P+P+VS  VVEPYN
Sbjct: 45  TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 80


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 59.7 bits (138), Expect = 4e-11
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +1

Query: 127 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
           HYT G E+VD VLD +RK  + C  LQGF + HS GGGTGSG+
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
           +LL+ ++  +Y  +    +++ P+P+VS  VVEPYN
Sbjct: 45  TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 80


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 59.7 bits (138), Expect = 4e-11
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +1

Query: 127 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
           HYT G E+VD VLD +RK  + C  LQGF + HS GGGTGSG+
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
           +LL+ ++  +Y  +    +++ P+P+VS  VVEPYN
Sbjct: 45  TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 80


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 59.7 bits (138), Expect = 4e-11
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = +1

Query: 127 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 255
           HYT G E+VD VLD +RK  + C  LQGF + HS GGGTGSG+
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
           +LL+ ++  +Y  +    +++ P+P+VS  VVEPYN
Sbjct: 45  TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 80


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +3

Query: 222 PLLRWRYRLWVTSLLMERLSVDYGKKSKLEFAIYPA--PQVSTAVVEPYNFY 371
           P L  R  L   ++  E +SVDYGK   L  A Y    PQ    V++   F+
Sbjct: 11  PSLAVRMALEALNIPYEHVSVDYGKAEHLT-AEYEKMNPQKEIPVLDDDGFF 61


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 51  HIQTVVSSRTTYYW*GRCGQQLCPWSLHHW 140
           H   +  +RT +Y   RC +  C +  ++W
Sbjct: 66  HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 214 LIFHSFGGGTGSGLLPY*WSVSPLT 288
           L+  S+ G   +  +PY WSV+ LT
Sbjct: 446 LMLGSWPGAMHADDIPYLWSVTDLT 470


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,107
Number of Sequences: 2352
Number of extensions: 9346
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)