Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1233
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 170 4e-43
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 170 4e-43
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 170 4e-43
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 170 4e-43
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 165 2e-41
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 165 2e-41
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 165 2e-41
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 165 2e-41
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 161 2e-40
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 161 2e-40
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 160 4e-40
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 158 1e-39
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 158 1e-39
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 154 3e-38
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 154 3e-38
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 152 1e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 106 6e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 106 6e-24
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 106 8e-24
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 104 3e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 102 9e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 102 9e-23
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 92 1e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 92 1e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 56 8e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 56 8e-09
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 1.4
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 1.4
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 2.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.2
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.2
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.2
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.2
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 7.4
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 26 9.8
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 26 9.8
AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical ... 26 9.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 170 bits (413), Expect = 4e-43
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSG 148
Score = 76.2 bits (179), Expect = 9e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN
Sbjct: 150 TSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYN 186
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 170 bits (413), Expect = 4e-43
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 124 LADNCTGLQGFLVFHSFGGGTGSG 147
Score = 76.2 bits (179), Expect = 9e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN
Sbjct: 149 TSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYN 185
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 170 bits (413), Expect = 4e-43
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSG 148
Score = 76.2 bits (179), Expect = 9e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN
Sbjct: 150 TSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYN 186
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 170 bits (413), Expect = 4e-43
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSG 148
Score = 76.2 bits (179), Expect = 9e-15
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYN
Sbjct: 150 TSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYN 186
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 165 bits (400), Expect = 2e-41
Identities = 69/84 (82%), Positives = 81/84 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 184
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 165 bits (400), Expect = 2e-41
Identities = 69/84 (82%), Positives = 81/84 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 184
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 165 bits (400), Expect = 2e-41
Identities = 69/84 (82%), Positives = 81/84 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQV TAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYN 184
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 165 bits (400), Expect = 2e-41
Identities = 69/84 (82%), Positives = 81/84 (96%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 184
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 161 bits (391), Expect = 2e-40
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 184
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 161 bits (391), Expect = 2e-40
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSG 146
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYN
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYN 184
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 160 bits (388), Expect = 4e-40
Identities = 68/84 (80%), Positives = 80/84 (95%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
L ++C LQGFLIFHSFGGGTGSG
Sbjct: 125 LTERCQSLQGFLIFHSFGGGTGSG 148
Score = 71.7 bits (168), Expect = 2e-13
Identities = 30/37 (81%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TSL+MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYN
Sbjct: 150 TSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYN 186
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 158 bits (384), Expect = 1e-39
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
LA+ C GLQGF +FHSFGGGTGSG
Sbjct: 122 LANNCEGLQGFFVFHSFGGGTGSG 145
Score = 71.7 bits (168), Expect = 2e-13
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
TS+LMERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYN
Sbjct: 147 TSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYN 183
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 158 bits (384), Expect = 1e-39
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
L + C GLQGFL+FHSFGGGTGSG
Sbjct: 130 LVENCRGLQGFLVFHSFGGGTGSG 153
Score = 73.3 bits (172), Expect = 7e-14
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
T+LLMERLSVDYGKKSKLEF IYPAPQVST++VEPYN
Sbjct: 155 TALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYN 191
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 154 bits (373), Expect = 3e-38
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +1
Query: 4 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 183
+FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++L
Sbjct: 72 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131
Query: 184 ADQCTGLQGFLIFHSFGGGTGSGLL 258
A+ C GLQGF+IFHSFGGGTGSG L
Sbjct: 132 AENCNGLQGFVIFHSFGGGTGSGFL 156
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYN
Sbjct: 157 SLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYN 192
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 154 bits (373), Expect = 3e-38
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +1
Query: 4 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 183
+FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++L
Sbjct: 44 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 103
Query: 184 ADQCTGLQGFLIFHSFGGGTGSGLL 258
A+ C GLQGF+IFHSFGGGTGSG L
Sbjct: 104 AENCNGLQGFVIFHSFGGGTGSGFL 128
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYN
Sbjct: 129 SLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYN 164
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 152 bits (368), Expect = 1e-37
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRIRK
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Query: 181 LADQCTGLQGFLIFHSFGGGTGSG 252
+ C GLQGFL+FHSFGGGTGSG
Sbjct: 128 QTENCEGLQGFLVFHSFGGGTGSG 151
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/37 (83%), Positives = 37/37 (100%)
Frame = +3
Query: 255 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+SLLMERLSV++GKKSKLEF++YPAPQVST+VVEPYN
Sbjct: 153 SSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYN 189
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 106 bits (255), Expect = 6e-24
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGM 147
Score = 34.3 bits (75), Expect = 0.037
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ ++ + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 106 bits (255), Expect = 6e-24
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGM 147
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 106 bits (254), Expect = 8e-24
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGM 147
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYN 184
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 104 bits (249), Expect = 3e-23
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGM 147
Score = 37.1 bits (82), Expect = 0.005
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYN 184
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 102 bits (245), Expect = 9e-23
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ LQGF + HS GGGTGSG+
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGM 147
Score = 35.1 bits (77), Expect = 0.021
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 102 bits (245), Expect = 9e-23
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ LQGF + HS GGGTGSG+
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGM 147
Score = 35.1 bits (77), Expect = 0.021
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 365
+LL+ ++ +Y + F++ P+P+VS VVEPYN
Sbjct: 149 TLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ L+GF + HS GGGTGSGL
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGL 147
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFYSHHPH 386
SLL+ +L +Y K+ +I P+ +VS VVEPYN PH
Sbjct: 149 SLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 1 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 180
A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 181 LADQCTGLQGFLIFHSFGGGTGSGL 255
A+ L+GF + HS GGGTGSGL
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGL 147
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFYSHHPH 386
SLL+ +L +Y K+ +I P+ +VS VVEPYN PH
Sbjct: 149 SLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPH 191
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 56.4 bits (130), Expect = 8e-09
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 171
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 172 IRKLADQCTGLQGFLIFHSFGGGTGSG 252
I + A+ L G L HS GGTGSG
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSG 150
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNF 368
SLL+ERL + KK ++++ ST VV PYN+
Sbjct: 153 SLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNW 190
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 56.4 bits (130), Expect = 8e-09
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 171
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 172 IRKLADQCTGLQGFLIFHSFGGGTGSG 252
I + A+ L G L HS GGTGSG
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSG 150
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 258 SLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNF 368
SLL+ERL + KK ++++ ST VV PYN+
Sbjct: 153 SLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNW 190
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -1
Query: 329 RGVDGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWSASLRILSKTK 156
R +D EL+ R AV +GE + + P+P PKE K + P + S+ R++ K K
Sbjct: 841 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 896
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -1
Query: 329 RGVDGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWSASLRILSKTK 156
R +D EL+ R AV +GE + + P+P PKE K + P + S+ R++ K K
Sbjct: 854 RELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKKEMSSRDRLMKKLK 909
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 99 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 4
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 28 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 171
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 405 SRVLKGCVGGENRSCRARRRQWKPEAR-GRWRTPV 304
SR G +RS RRR +P AR GR R+P+
Sbjct: 34 SRSSSSSSSGRSRSRSPRRRDTRPPARGGRSRSPI 68
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 223 GRSGILADRYTGQRACGFCPKP 158
G+ IL D GQ+ CG C +P
Sbjct: 71 GQGTILCDAGVGQKRCGKCVRP 92
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +3
Query: 240 YRLWVTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFYSH 377
Y WV L E ++ KK + I P P+ +VE + H
Sbjct: 2044 YAKWVKECLQEPKTIKLEKKIIINPTIPPTPRGERVLVEKLEIHEH 2089
>AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical
protein F14D2.7 protein.
Length = 471
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 257 SNPEPVPPPKEWKIRNPCRPVHWSASLRILSKTKS 153
SN EPV PP+ ++NP + L IL K S
Sbjct: 171 SNNEPVAPPRVLLLQNPNHLCWLNCILNILYKATS 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,916,778
Number of Sequences: 27780
Number of extensions: 211823
Number of successful extensions: 680
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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