Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1233
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.27 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.27 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 202 LQGFLIFHSFGGGTGSG 252
           L+G +I HS+GGG G G
Sbjct: 656 LRGSIIDHSYGGGFGFG 672


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 202 LQGFLIFHSFGGGTGSG 252
           L+G +I HS+GGG G G
Sbjct: 694 LRGSIIDHSYGGGFGFG 710


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 239 PPPKEWKIRNPC 204
           PPP++WK  + C
Sbjct: 416 PPPEDWKPLDKC 427


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = -2

Query: 178 CGFCPKPNLRFPFQWCSDHGHSCWPH 101
           C  C +    +    C D G   WPH
Sbjct: 560 CDQCEEYEYVYDEYTCMDCGPGKWPH 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,970
Number of Sequences: 438
Number of extensions: 2763
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)