Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1232
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    27   0.19 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.19 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   5.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 237 GVPTPLILWKPYQRSSRSGA*KRLR 163
           GVPTP I+WK     S+SG  + LR
Sbjct: 735 GVPTPTIVWKK-ATGSKSGEYEELR 758


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 237 GVPTPLILWKPYQRSSRSGA*KRLR 163
           GVPTP I+WK     S+SG  + LR
Sbjct: 731 GVPTPTIVWKK-ATGSKSGEYEELR 754


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 243 LNGVPTPLILWKPYQRSSRSGA 178
           +NG   P I+W   + S+R+ A
Sbjct: 284 MNGTTLPQIMWGTKETSTRTDA 305


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 243 LNGVPTPLILWK 208
           + GVPT LI WK
Sbjct: 255 IKGVPTYLIKWK 266


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 416 CCPQSMFGFCLNRLNRY 466
           CC  S+   C   L+RY
Sbjct: 119 CCTASILNLCAIALDRY 135


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 416 CCPQSMFGFCLNRLNRY 466
           CC  S+   C   L+RY
Sbjct: 119 CCTASILNLCAIALDRY 135


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 416 CCPQSMFGFCLNRLNRY 466
           CC  S+   C   L+RY
Sbjct: 119 CCTASILNLCAIALDRY 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,379
Number of Sequences: 438
Number of extensions: 4075
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)