Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1231
(531 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 173 5e-44
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 173 6e-44
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 173 6e-44
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 171 2e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 171 2e-43
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 171 2e-43
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 171 2e-43
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 171 3e-43
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 171 3e-43
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 153 7e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 147 4e-36
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 147 5e-36
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 2e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 89 2e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 77 6e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 55 3e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 6e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 1e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.069
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.6
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (422), Expect = 5e-44
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFNTPAMYVAIQA
Sbjct: 121 MTQIMFETFNTPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (421), Expect = 6e-44
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFNTPAMYVAIQA
Sbjct: 121 MTQIMFETFNTPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (421), Expect = 6e-44
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFNTPAMYVAIQA
Sbjct: 121 MTQIMFETFNTPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 171 bits (417), Expect = 2e-43
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN PAMYVAIQA
Sbjct: 121 MTQIMFETFNVPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 171 bits (416), Expect = 2e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN+PAMYVAIQA
Sbjct: 121 MTQIMFETFNSPAMYVAIQA 140
Score = 103 bits (247), Expect = 7e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 171 bits (416), Expect = 2e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN+PAMYVAIQA
Sbjct: 121 MTQIMFETFNSPAMYVAIQA 140
Score = 103 bits (247), Expect = 7e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 171 bits (416), Expect = 2e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN+PAMYVAIQA
Sbjct: 121 MTQIMFETFNSPAMYVAIQA 140
Score = 103 bits (247), Expect = 7e-23
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 171 bits (415), Expect = 3e-43
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN PAMYVAIQA
Sbjct: 121 MTQIMFETFNAPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 171 bits (415), Expect = 3e-43
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETFN PAMYVAIQA
Sbjct: 121 MTQIMFETFNAPAMYVAIQA 140
Score = 107 bits (258), Expect = 3e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 153 bits (371), Expect = 7e-38
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
Q++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREK
Sbjct: 62 QARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREK 121
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFE+F P+MY+ IQA
Sbjct: 122 MTQIMFESFAFPSMYIGIQA 141
Score = 102 bits (244), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 264
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA+A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 147 bits (357), Expect = 4e-36
Identities = 62/80 (77%), Positives = 74/80 (92%)
Frame = +3
Query: 255 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REK
Sbjct: 16 EARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREK 75
Query: 435 MTHIMFETFNTPAMYVAIQA 494
MT IMFETF P+MY+ +QA
Sbjct: 76 MTQIMFETFAVPSMYIGMQA 95
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEARAK 264
MVGM + D +VGD+A A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 147 bits (356), Expect = 5e-36
Identities = 68/96 (70%), Positives = 77/96 (80%)
Frame = +3
Query: 207 RDGRYGTEGLLCRR*GQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 386
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 387 VLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQA 494
VLLTEAP NPKANREKMT IMFE+F+ PAMYV++Q+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 261
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 98.7 bits (235), Expect = 2e-21
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 452
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 453 ETFNTPAMYVAIQA 494
E +N +++ IQA
Sbjct: 126 EKYNFAGVFIQIQA 139
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 249
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = +3
Query: 279 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 458
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 459 FNTPAMYVAIQA 494
FN P +Y+A+ +
Sbjct: 146 FNVPGLYIAVNS 157
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 186
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 77.4 bits (182), Expect = 6e-15
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = +3
Query: 261 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 440
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 441 HIMFETFNTPAMYVA 485
+MFE + PA+++A
Sbjct: 145 ELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 189
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 261 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 189
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTHIMFETFN 464
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 465 TPAMYVAIQA 494
Y + QA
Sbjct: 117 VSGFYASEQA 126
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 192
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.0 bits (124), Expect = 6e-08
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 279 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 458
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 459 FNTPAMYVA 485
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 195
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFN 464
P + +V ++ ME I + F + +HP+L+TE NP +R KM ++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 465 TPAMYVAIQA 494
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 249
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.069
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 224 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 87
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 434
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 200 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 78
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,870,160
Number of Sequences: 28952
Number of extensions: 298855
Number of successful extensions: 841
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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