Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1229
         (604 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    40   0.034
UniRef50_Q1E0X5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +2

Query: 194 RWVDELTAHLVLSGYWSP 247
           RWVDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep:
          Like moricin - Manduca sexta (Tobacco hawkmoth)
          (Tobacco hornworm)
          Length = 248

 Score = 40.3 bits (90), Expect = 0.034
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -2

Query: 72 MGYGNHSPSGGPYARLPTRAIKK 4
          MG GNHSPSG PYA LPTRA  K
Sbjct: 1  MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q1E0X5 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 1574

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 114 VGNSLALPLALLTSMGYGNHSPSGGPYARLPTRAI 10
           +  S+A PLA  TS G+   +PSG  + R  T ++
Sbjct: 867 ISGSIAKPLASSTSFGHSPRTPSGSEFGRFSTESV 901


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,539,723
Number of Sequences: 1657284
Number of extensions: 10400863
Number of successful extensions: 15995
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15994
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)