Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1229
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 480 IDAFRCP*LLSEFEPIDTFNINL 412
           +D F C  ++  F  ID  N N+
Sbjct: 199 LDPFACTHVIYAFATIDPHNFNM 221


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 532 NFRFDICLYFGIRPP 576
           +F + IC  FGI PP
Sbjct: 15  SFFYKICNIFGIVPP 29


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 77  RLWATVTTHHQVGR 36
           +LWATV T  QV R
Sbjct: 279 QLWATVYTSSQVTR 292


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 532 NFRFDICLYFGIRPP 576
           +F + IC  FGI PP
Sbjct: 15  SFFYKICNIFGIVPP 29


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 77  RLWATVTTHHQVGR 36
           +LWATV T  QV R
Sbjct: 275 QLWATVYTSSQVTR 288


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 69  GYGNHSPSGGP 37
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,738
Number of Sequences: 336
Number of extensions: 2690
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)