Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1228
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   4.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   4.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 55  YKDLTSFSYSLGFELF*IMS--ILLKSTAFMTLFSFYFVEVGFL 180
           Y  LTSF  +  F +F +     L K+T   T++  YF+ +G L
Sbjct: 287 YIILTSFLNNFYFIIFQVFESFYLHKATTLETVY--YFISLGLL 328


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 225 WLYIRFTIAIQFSTKKKTDFYE 160
           W+ + FT+ +  S   +TDFY+
Sbjct: 37  WILL-FTLGVTISGVYRTDFYK 57


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +1

Query: 199 CDGKTNIEPCCVWY 240
           CD   N+  C  WY
Sbjct: 222 CDWVRNVPECADWY 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,485
Number of Sequences: 336
Number of extensions: 1991
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)