Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1226
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   4.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   6.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.3  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 356 LQFADRNKHDGQRYVFIWP 300
           + F+DR K  G R   IWP
Sbjct: 554 VSFSDRLKSRGIRTAAIWP 572


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 388 HA*FQHRERRGPHWW 432
           H  FQH     P+WW
Sbjct: 82  HKVFQHLMIHRPNWW 96


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 175 YVNDVIVLTRFTSRILRVKHNQKMMSFVFQN*I*EMMSLVFQN*T 41
           Y+N+V++        +++  N K+MS  F++    +M+L+ +  T
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEIT 156


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 175 YVNDVIVLTRFTSRILRVKHNQKMMSFVFQN*I*EMMSLVFQN*T 41
           Y+N+V++        +++  N K+MS  F++    +M+L+ +  T
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEIT 156


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 175 YVNDVIVLTRFTSRILRVKHNQKMMSFVFQN*I*EMMSLVFQN*T 41
           Y+N+V++        +++  N K+MS  F++    +M+L+ +  T
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEIT 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,180
Number of Sequences: 336
Number of extensions: 2698
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)