Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1226
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    71   2e-14
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           53   6e-09
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           46   6e-07
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.64 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   5.9  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   5.9  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   5.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.9  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 71.3 bits (167), Expect = 2e-14
 Identities = 29/63 (46%), Positives = 44/63 (69%)
 Frame = -1

Query: 448 GEHFNPTNEDHGAPDAEIRHVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVV 269
           G H+NP    HGAP+ ++RHVGDLGNI +   N + + +  D V+SLYG  ++IGR++V+
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVI 138

Query: 268 HTD 260
           H +
Sbjct: 139 HAE 141



 Score = 43.2 bits (97), Expect = 5e-06
 Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
 Frame = -3

Query: 500 GFHVHEYGDTSTDCTSGR*AF*SHQ*GPRRSR-C*N*ACWRLGQHKVGWLQFADRNKHDG 324
           GFH+HE GD +  C S       H    + S    N     +G   +G +  AD N    
Sbjct: 63  GFHIHEKGDLTDGCASTG----GHYNPDKVSHGAPNDQVRHVGD--LGNIA-ADENGIAK 115

Query: 323 QRYVFIWPS*Y-YRKKFGRA---HGQ-RDLGLTDHPLSKTTGNSGGRLGCGIIAI 174
             Y     S Y  R   GRA   H +  DLG T+HP S  TGN+GGR+ CG+I I
Sbjct: 116 TSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 52.8 bits (121), Expect = 6e-09
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -1

Query: 439 FNPTNEDHGAPDAEIRHVGDLGNIKSVGYNS-LTEINMMDNVMSLYGPHNIIGRSLVV 269
           +NP   DHGAPD    HVGDLGNI  V Y++ L +I + +  ++L G  +IIGR+L +
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNI--VAYSTGLAKIQIANKKLTLVGDRSIIGRTLSI 56



 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 254 DLGLTDHPLSKTTGNSGGRLGCGIIAICK 168
           DLG   H  SKTTGNSG  + C II + +
Sbjct: 62  DLGRGKHDYSKTTGNSGNCIACAIIGVAR 90


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 46.4 bits (105), Expect = 6e-07
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3

Query: 254 DLGLTDHPLSKTTGNSGGRLGCGIIAICK 168
           DLG+  H LSKTTG++G RL CG+I +CK
Sbjct: 46  DLGVGGHELSKTTGDAGARLACGVIGLCK 74



 Score = 39.5 bits (88), Expect = 6e-05
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = -1

Query: 391 HVGDLGNIKSVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKE 254
           H GD+GNI +   N   ++++    ++L G  N++GRSLVVH D +
Sbjct: 1   HAGDMGNIVA-DENGEAKVDLTATQIALSGALNVVGRSLVVHADPD 45


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1

Query: 40   QFSFEKQVTSFLKFSFEKQMTSSFDCVLHVEFYS*SELKR*HHLHM 177
            Q+ ++KQ    L+FS  K+   + D V+H  + S  ++ R   +H+
Sbjct: 1938 QYLYDKQ--GILRFSLHKEHNETLDRVIHFTYVSDDKVAREALVHL 1981


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 96  LFFKTKFKK*CHLFFKTELALRVEFYV 16
           +FFKTK +K    ++   L L   FY+
Sbjct: 144 VFFKTKLRKLSSSYYLAALGLSDTFYL 170


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 151 LKR*HHLHMAIIPHPKRPPELPVVLLN 231
           LK  H LH   + H   P   PV++LN
Sbjct: 174 LKELHELHENWLIHGASPRPAPVLVLN 200


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 151 LKR*HHLHMAIIPHPKRPPELPVVLLN 231
           LK  H LH   + H   P   PV++LN
Sbjct: 175 LKELHELHENWLIHGASPRPAPVLVLN 201


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
 Frame = +1

Query: 175 MAIIPHPKRPPEL-----PVVLLN 231
           +A+IP P +PP L     P++LLN
Sbjct: 480 LALIPKPGKPPGLASSFRPILLLN 503


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 364  SVGYNSLTEINMMDNVMSLYGPHNIIGRSLVVHTDKE 254
            S+ YN+   +NM   V   Y  H  + R  +V+  +E
Sbjct: 1958 SIHYNAPERVNMDRVVHFTYSSHGKVMREALVNLTRE 1994


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 126 RRILLVKRVKTMTSFTYGNYSASQTAARIAGCF 224
           RR    K +  +  + YG       AAR+A CF
Sbjct: 66  RRATRAKSIGLLRRYRYGAKRYVARAARLAQCF 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,265
Number of Sequences: 2352
Number of extensions: 11318
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)