Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1225
(495 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 70 4e-12
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 70 4e-12
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 70 4e-12
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 70 4e-12
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 70 4e-12
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 70 4e-12
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 70 4e-12
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 70 4e-12
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 66 5e-11
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 66 5e-11
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 66 5e-11
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 66 5e-11
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 66 5e-11
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 66 5e-11
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 66 5e-11
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 58 1e-08
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 2.2
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 31 2.9
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 31 2.9
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 31 2.9
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 31 2.9
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 5.1
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 5.1
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 5.1
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 5.1
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 5.1
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 5.1
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 66 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 102
Score = 66.5 bits (155), Expect = 5e-11
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +3
Query: 60 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 239
++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 240 VLDS 251
VLDS
Sbjct: 61 VLDS 64
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 108 NIDDLFDREELSAAPDPGWPDCFNSGVFV 136
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 70.1 bits (164), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD
Sbjct: 68 DSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDAD 104
Score = 68.9 bits (161), Expect = 9e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 234 VDVLDS 251
VDVLDS
Sbjct: 61 VDVLDS 66
Score = 60.1 bits (139), Expect = 4e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFL 468
N D+LF+REELSAAPD GWPDCFNSGVF+
Sbjct: 110 NIDDLFDREELSAAPDPGWPDCFNSGVFV 138
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 64 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 97
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 103 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 134
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = +3
Query: 81 ATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDS 251
ATND Y GALVL SLRR V LITP VS +R L VF EV+ V+++DS
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDS 59
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 73 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 106
Score = 62.5 bits (145), Expect = 8e-10
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 234 VDVLDS 251
V+++DS
Sbjct: 63 VNLIDS 68
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 112 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 143
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 137
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +3
Query: 27 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 206
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 207 RAVFSEVVTVDVLDS 251
VF EV+ V+++DS
Sbjct: 85 SKVFDEVIEVNLIDS 99
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 143 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 174
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 16 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 49
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 55 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 86
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 137
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +3
Query: 27 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 206
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 207 RAVFSEVVTVDVLDS 251
VF EV+ V+++DS
Sbjct: 85 SKVFDEVIEVNLIDS 99
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 143 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 174
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 73 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 106
Score = 62.5 bits (145), Expect = 8e-10
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 233
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 234 VDVLDS 251
V+++DS
Sbjct: 63 VNLIDS 68
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 112 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 143
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 66.5 bits (155), Expect = 5e-11
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDAD 137
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +3
Query: 27 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 206
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 207 RAVFSEVVTVDVLDS 251
VF EV+ V+++DS
Sbjct: 85 SKVFDEVIEVNLIDS 99
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 143 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 174
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 58.4 bits (135), Expect = 1e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 278 QRPELGITFTKIHCWNLTQYEKCVFLDAD 364
+RPELG+T TK+HCW LT Y KCVFLDAD
Sbjct: 1 KRPELGLTLTKLHCWTLTHYSKCVFLDAD 29
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 382 NCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
N DELF+R E SAAPD GWPDCFNSGVF+ F+P
Sbjct: 35 NVDELFDRGEFSAAPDPGWPDCFNSGVFV-FQP 66
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 179 GRCDECYGRVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 36
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 173
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 173
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 173
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 54 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 173
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 86 KRLLRLGSSGAGPFAPPRRLGVPCRST 166
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 147 PSRRGGANGPAPELPSRRSRLWPELPML 64
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 147 PSRRGGANGPAPELPSRRSRLWPELPML 64
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 147 PSRRGGANGPAPELPSRRSRLWPELPML 64
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 147 PSRRGGANGPAPELPSRRSRLWPELPML 64
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 147 PSRRGGANGPAPELPSRRSRLWPELPML 64
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,572,859
Number of Sequences: 237096
Number of extensions: 1410310
Number of successful extensions: 3956
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3956
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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