Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1225
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 66 1e-11
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 66 1e-11
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 66 1e-11
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical... 57 8e-09
AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine r... 29 2.4
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 28 4.3
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 28 4.3
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 28 4.3
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 28 4.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 5.7
AF098997-14|AAK71402.1| 321|Caenorhabditis elegans Serpentine r... 27 5.7
Z82062-6|CAB04894.1| 312|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81587-14|CAB04711.1| 312|Caenorhabditis elegans Hypothetical p... 27 7.5
Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical p... 27 7.5
U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical pr... 27 7.5
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 27 9.9
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 9.9
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 9.9
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 9.9
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 9.9
AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 27 9.9
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 66.1 bits (154), Expect = 1e-11
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
+L L++RP+LG+TFTK+HCW LTQY KCVFLDAD
Sbjct: 70 NLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDAD 103
Score = 63.3 bits (147), Expect = 9e-11
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 60 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 239
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 240 VLDS 251
V +S
Sbjct: 62 VFNS 65
Score = 50.4 bits (115), Expect = 7e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 379 QNCDELFEREELSAAPDVGWPDCFNSGVFL 468
+N DELF R + SAA D+GWPD FNSGVF+
Sbjct: 108 RNADELFTRPDFSAASDIGWPDSFNSGVFV 137
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 66.1 bits (154), Expect = 1e-11
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
+L L++RP+LG+TFTK+HCW LTQY KCVFLDAD
Sbjct: 70 NLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDAD 103
Score = 63.3 bits (147), Expect = 9e-11
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 60 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 239
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 240 VLDS 251
V +S
Sbjct: 62 VFNS 65
Score = 50.4 bits (115), Expect = 7e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 379 QNCDELFEREELSAAPDVGWPDCFNSGVFL 468
+N DELF R + SAA D+GWPD FNSGVF+
Sbjct: 108 RNADELFTRPDFSAASDIGWPDSFNSGVFV 137
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 66.1 bits (154), Expect = 1e-11
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +2
Query: 263 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
+L L++RP+LG+TFTK+HCW LTQY KCVFLDAD
Sbjct: 70 NLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDAD 103
Score = 63.3 bits (147), Expect = 9e-11
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 60 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 239
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 240 VLDS 251
V +S
Sbjct: 62 VFNS 65
Score = 50.4 bits (115), Expect = 7e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 379 QNCDELFEREELSAAPDVGWPDCFNSGVFL 468
+N DELF R + SAA D+GWPD FNSGVF+
Sbjct: 108 RNADELFTRPDFSAASDIGWPDSFNSGVFV 137
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 61.7 bits (143), Expect = 3e-10
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +2
Query: 254 NAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDAD 364
++ +L+L+ RP+LG+TFTK HCW LTQY K VFLDAD
Sbjct: 67 DSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDAD 103
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +3
Query: 66 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 245
AW+TLATND Y GAL L +SL +G+ LIT +S ++R++L F EV VD+
Sbjct: 4 AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVVDIF 63
Query: 246 DS 251
+S
Sbjct: 64 NS 65
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 379 QNCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
+N DELFER + SAA D+GWPD FNSGVF+ F P
Sbjct: 108 RNSDELFERPDFSAAADIGWPDMFNSGVFV-FTP 140
>AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical
protein Y73F8A.31 protein.
Length = 173
Score = 56.8 bits (131), Expect = 8e-09
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 379 QNCDELFEREELSAAPDVGWPDCFNSGVFLSFKP 480
+NCDELFER + SAA D+GWPD FNSGVF+ F P
Sbjct: 89 RNCDELFERPDFSAAADIGWPDMFNSGVFV-FTP 121
>AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine
receptor, class i protein4 protein.
Length = 355
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 400 RRVHRNFGITKYIGI*EYAFLVLSEVPAVYLC 305
R V FGIT +I I + F++ +VPA+ C
Sbjct: 88 REVQVKFGITSHICITFFTFILCLQVPALLTC 119
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 155 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 30
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 615 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 656
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 155 RVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCSLV 30
RV RAG A R + +Q +V Q++PC + C ++
Sbjct: 552 RVRRAGFAYRRAFDKFAQRYAIVSPQTWPCFQGDQQRACEII 593
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -3
Query: 247 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKP*ESFVARV 74
S S +T KT R S ++ TV SAT + A+R A +PKP S V V
Sbjct: 273 SEASYASTRPKTERSSSHKSASTV-TSSATITTLDSAKRKPLAKNASPKPPRSPVLEV 329
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -3
Query: 247 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKP*ESFVARV 74
S S +T KT R S ++ TV SAT + A+R A +PKP S V V
Sbjct: 269 SEASYASTRPKTERSSSHKSASTV-TSSATITTLDSAKRKPLAKNASPKPPRSPVLEV 325
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 247 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKP 98
S +S +TT +A + S S T S T G T + S AST P
Sbjct: 819 STSSVITTGSTSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVSP 868
>AF098997-14|AAK71402.1| 321|Caenorhabditis elegans Serpentine
receptor, class i protein32 protein.
Length = 321
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = -3
Query: 415 IALHARRVHRNFGITKYIGI*EYA----FLVLSEVPAVYLCEGDAELWPLEEGQVSRVLE 248
IA + HRNF + I + +LV+ + C G A + ++ + L+
Sbjct: 165 IATNHPEYHRNFEELQNFAIFHFNSWCYYLVVVTISGGLFCGGAAIFTTADMFRMMKDLQ 224
Query: 247 SRTSTVTTSEKTARRRSLIASLTVGVM 167
+R S + A +SLIA L V +M
Sbjct: 225 TRVSRSSLKRYRATIQSLIAQLVVSMM 251
>Z82062-6|CAB04894.1| 312|Caenorhabditis elegans Hypothetical
protein W02A11.1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.5
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = -3
Query: 304 EGDAELWPLEEGQVSRVLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSE 125
EGD + + GQ+ + R T+ R +I +SATAGY R +
Sbjct: 17 EGDTVIVYVTYGQMVPTIVKRGQTLMMKYGALRHEFIIGKRWGQRLSATAGYVYILRPTS 76
Query: 124 WASTRA-PKP*ESFVARVTHARFDIM--KPGVVSCDSSS 17
TRA P+ + ++ KPG V C+S +
Sbjct: 77 DLWTRALPRRTQILYTADCAQILSLLDAKPGSVICESGT 115
>Z81587-14|CAB04711.1| 312|Caenorhabditis elegans Hypothetical
protein W02A11.1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.5
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = -3
Query: 304 EGDAELWPLEEGQVSRVLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSE 125
EGD + + GQ+ + R T+ R +I +SATAGY R +
Sbjct: 17 EGDTVIVYVTYGQMVPTIVKRGQTLMMKYGALRHEFIIGKRWGQRLSATAGYVYILRPTS 76
Query: 124 WASTRA-PKP*ESFVARVTHARFDIM--KPGVVSCDSSS 17
TRA P+ + ++ KPG V C+S +
Sbjct: 77 DLWTRALPRRTQILYTADCAQILSLLDAKPGSVICESGT 115
>Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical
protein R06F6.12 protein.
Length = 417
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 407 KSYRLLPTWDGP-TVSTPAFFC 469
KSY+L P DGP V TP F C
Sbjct: 358 KSYQLAPVVDGPHLVHTPNFCC 379
>U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical
protein F26A1.8 protein.
Length = 405
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 45 GFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSV 149
GF+ + AW +A LG V +L +AGS+
Sbjct: 348 GFLCTKPAWQLIAVGGCIILGGFVFFSALSKAGSI 382
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 197 PHSFTDGRCDECYGRVHRAGA 135
P+ F + C+EC GR HR A
Sbjct: 365 PYFFHNQSCEECSGRYHRQHA 385
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 250 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRA---PKP*E 92
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 250 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRA---PKP*E 92
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 250 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRA---PKP*E 92
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -3
Query: 289 LWPLEEGQVSRVLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTR 110
+WP + QV R + T+ +K RRS + + G +A + S+WA
Sbjct: 1144 MWPRNDLQVGRFMIKMTNMDFIVQKNIMRRSFKVADSTGKFAART--LTHYQYSQWAERG 1201
Query: 109 APK 101
PK
Sbjct: 1202 VPK 1204
>AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical
protein Y82E9BR.7 protein.
Length = 536
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -3
Query: 322 PAVYLCEGDAELWPLEEGQVSRVLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGY 149
PA+ +C+ A WP+++G +T +T + + S ++ + S+TA Y
Sbjct: 342 PAIGVCDRIANYWPVDDG------NGKTVNITVMDGVCLKNSKCPCPSLELSSSTARY 393
>AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical
protein Y54G2A.11a protein.
Length = 482
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 401 SVKSYRLLPTWDGPTVSTPAFFCLSN 478
S KS L+ WD T PAFF + N
Sbjct: 309 SEKSVDLVLNWDNETTILPAFFPIDN 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,800,534
Number of Sequences: 27780
Number of extensions: 210767
Number of successful extensions: 725
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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