Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1225
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.5  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 165 VLRQGTPSRRGGANGPAPELPSRR 94
           +LRQG P    GA G   ++P  R
Sbjct: 56  LLRQGVPGHHYGAAGSQQDMPYPR 79


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 412 ALHARRVHRNFGITKYIGI*EYAFLV--LSEVPAVYLCEGDA 293
           A+  R++  NF  +K+IG   Y   +  L+ VP +Y   G+A
Sbjct: 692 AVKTRKIPENFNESKFIGFTMYTTCIIWLAFVP-IYFGTGNA 732


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 412 ALHARRVHRNFGITKYIGI*EYAFLV--LSEVPAVYLCEGDA 293
           A+  R++  NF  +K+IG   Y   +  L+ VP +Y   G+A
Sbjct: 782 AVKTRKIPENFNESKFIGFTMYTTCIIWLAFVP-IYFGTGNA 822


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 479 GLKDKKTPELKQSGHP 432
           GL+D+K P+ +  G+P
Sbjct: 629 GLRDRKYPDARAMGYP 644



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 477 FERQKNAGVETVGPSHVGS 421
           F+RQ  AGVET+     G+
Sbjct: 645 FDRQPRAGVETLAQFLTGN 663


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 209 AKTIPHSFTDGRCDECYGRVHR 144
           +K+  + FT+ RCD  Y R  +
Sbjct: 286 SKSSDYGFTECRCDPGYFRAEK 307


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 314 HCWNLTQYE 340
           HC+N TQY+
Sbjct: 608 HCFNCTQYQ 616


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 402 LEEFIAILESPNISASRNTHFS 337
           ++EF+  L+S + +  RN+H S
Sbjct: 541 MDEFVVNLKSGSNTIERNSHES 562


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 402 LEEFIAILESPNISASRNTHFS 337
           ++EF+  L+S + +  RN+H S
Sbjct: 541 MDEFVVNLKSGSNTIERNSHES 562


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 402 LEEFIAILESPNISASRNTHFS 337
           ++EF+  L+S + +  RN+H S
Sbjct: 167 MDEFVVNLKSGSNTIERNSHES 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,523
Number of Sequences: 438
Number of extensions: 2650
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)