Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1224
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              29   0.021
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   4.2  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    20   7.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    20   7.3  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 28.7 bits (61), Expect = 0.021
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 338 ASLSTFQQMWIS 303
           ASLSTFQQMWIS
Sbjct: 122 ASLSTFQQMWIS 133


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 349 SDPQPPSLPSNKCGSRNRSTTSL 281
           ++PQP     +KC +RN +T ++
Sbjct: 699 AEPQPIGKALSKCHNRNVTTCNM 721


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 323 FQQMWISKQEYDESGPSIVHRK 258
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -1

Query: 316 KCGSRNRSTTSLAPPLYTGSALNAPRVSC 230
           +C S + +T +    +  G+ +N P ++C
Sbjct: 44  RCMSEHGTTQAQIDDVDKGNLVNEPSITC 72


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -1

Query: 316 KCGSRNRSTTSLAPPLYTGSALNAPRVSC 230
           +C S + +T +    +  G+ +N P ++C
Sbjct: 44  RCMSEHGTTQAQIDDVDKGNLVNEPSITC 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,175
Number of Sequences: 438
Number of extensions: 1519
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)