Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1223
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 4e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 4e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 4e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 4e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 117 7e-27
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 2e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 2e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 5e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 5e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 91 7e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 65 3e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.2
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 6.9
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 6.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 107 bits (257), Expect = 5e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 105 bits (253), Expect = 2e-23
Identities = 45/51 (88%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAM 89
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 91 VAIQAVLSLYASGRTT 106
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAM 119
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 121 VAIQAVLSLYASGRTT 136
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 135 VAIQAVLSLYASGRTT 150
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPK+NREKMT IMFETFNTPAM
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAM 132
Score = 102 bits (244), Expect = 2e-22
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
V IQAVLSLYA GRTT
Sbjct: 134 VNIQAVLSLYASGRTT 149
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 117 bits (281), Expect = 7e-27
Identities = 48/83 (57%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 437
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 438 LNPKANREKMTHIMFETFNTPAM 506
LNP NRE+ I FETFN PA+
Sbjct: 114 LNPLKNRERSAEIFFETFNVPAL 136
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
+ +QAVLSLYA GRTT
Sbjct: 138 IQMQAVLSLYATGRTT 153
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 2e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (257), Expect = 5e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (257), Expect = 5e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 9e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 356
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 413
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 414 PVLLTEAPLNPKANREKMTHIMFETF 491
+LLTE PLNP +NREKM +MFE +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 90.6 bits (215), Expect = 7e-19
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 437
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 438 LNPKANREKMTHIMFETFNTPAM 506
LN NRE IMFE+FN P +
Sbjct: 124 LNTPENREYTAEIMFESFNVPGL 146
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +3
Query: 321 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTP 500
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 501 A 503
A
Sbjct: 154 A 154
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 398
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 399 APEEHPVLLTEAPLNPKANREKMTHIMFETF 491
+ LT+ A + + I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 398
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 399 APEEHPVLLTEAPLNPKANREKMTHIMFETF 491
+ LT+ A + + I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 249 YGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 428
+GQ +G A + G L+ P+EH I T + + +L P E P+L+
Sbjct: 66 HGQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQ 121
Query: 429 EAP 437
+AP
Sbjct: 122 QAP 124
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQG 237
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDPYHVRNIQ 493
AC GT SPA GSP PQ D + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDPYHVRNIQ 493
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDPYHVRNIQ 493
AC GT SPA GSP PQ D + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 392 ACRPRGTPSPAH*GSPQPQGQQREDDPYHVRNIQ 493
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,594,068
Number of Sequences: 27780
Number of extensions: 343108
Number of successful extensions: 1153
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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