Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1223
(557 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 8e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 8e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 8e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 161 4e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 152 2e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 150 7e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 2e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 90 1e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 5e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 69 2e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 50 1e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 3e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 4e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 37 0.010
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.1
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 3.7
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.4
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 8.5
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 27 8.5
At3g58650.1 68416.m06537 expressed protein 27 8.5
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 8.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 3e-47
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
APLNPKANREKMT IMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAM 134
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNPKANREKMTHIMFETFNTPAM 506
PLNPKANREKMT IMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 8e-46
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNPKANREKMTHIMFETFNTPAM 506
PLNPKANREKMT IMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 PLNPKANREKMTHIMFETFNTPAM 506
PLNPKANREKMT IMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
VAIQAVLSLYA GRTT
Sbjct: 136 VAIQAVLSLYASGRTT 151
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 161 bits (390), Expect = 4e-40
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 435 PLNPKANREKMTHIMFETFNTPAM 506
PLNPK NREKMT IMFE+F P+M
Sbjct: 112 PLNPKVNREKMTQIMFESFAFPSM 135
Score = 83.4 bits (197), Expect = 9e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 509 VAIQAVLSLYAFGRTT 556
+ IQAVLSLY+ GRTT
Sbjct: 137 IGIQAVLSLYSSGRTT 152
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 152 bits (368), Expect = 2e-37
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 435 PLNPKANREKMTHIMFETFNTPAM 506
PLNPKA+REKMT IMFETF P+M
Sbjct: 66 PLNPKADREKMTQIMFETFAVPSM 89
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 150 bits (363), Expect = 7e-37
Identities = 68/90 (75%), Positives = 75/90 (83%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 417 VLLTEAPLNPKANREKMTHIMFETFNTPAM 506
VLLTEAP NPKANREKMT IMFE+F+ PAM
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAM 123
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 228
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +3
Query: 258 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 437
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 438 LNPKANREKMTHIMFETFN 494
LNP NREKM MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 261 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 432 APLNPKANREKMTHIMFETFNTPAM 506
+PL P +RE I+FETFN P +
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGL 151
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 267 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 443
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 444 PKANREKMTHIMFETFNTPAM*SPSKP 524
+ REK +MFE + PA+ P
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 240 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 417 VLLTEAPLNPKANREK 464
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTHIMFETFN 494
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 222
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 309 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 488
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 489 F 491
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFN 494
P + +V ++ ME I + F + +HP+L+TE NP +R KM ++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 495 TPAM 506
PA+
Sbjct: 145 VPAV 148
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -1
Query: 368 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LPIPTITP*WRGLPTIEGNT 198
P L V+ ++ D + + + + YI + +P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 197 ARGASSPAKPALHIPEPLSTTNAATSS 117
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 455
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 456 REK 464
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 455
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 456 REK 464
REK
Sbjct: 225 REK 227
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 207 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 314
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 364 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 275
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 230 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 108
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 415 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 257
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 282 PHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCETGL 163
P + HK PS D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 201 VPLDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 362
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 210 DRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIV 338
D G+ G D G+++ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,957,526
Number of Sequences: 28952
Number of extensions: 325487
Number of successful extensions: 904
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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