Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1222
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 69 4e-12
04_04_0670 - 27128153-27129075,27129152-27129266,27129348-271295... 32 0.29
03_02_0390 + 8056006-8057502 30 1.5
03_02_0205 + 6389343-6389609,6390418-6390486,6390662-6390757,639... 30 1.5
10_08_0496 - 18328875-18328907,18329056-18329106,18329562-183296... 29 2.0
04_04_0981 + 29912275-29912814 29 2.0
12_01_0779 + 7129879-7130398,7130585-7130664 29 2.7
10_08_0494 - 18308105-18309490 29 2.7
08_01_0918 + 9043949-9045625 29 2.7
07_03_1347 + 25932185-25932748,25933151-25933755,25935797-259362... 29 2.7
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 29 2.7
09_04_0740 + 19850745-19851254 29 3.5
06_01_0707 + 5136210-5136584 29 3.5
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 29 3.5
09_04_0258 - 16175258-16176069,16176111-16176414 28 4.7
11_04_0451 - 17863381-17864808 28 6.2
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 28 6.2
10_08_0210 - 15874289-15875663,15878248-15879263 28 6.2
09_04_0350 + 16899076-16900164 28 6.2
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 28 6.2
05_03_0638 - 16489181-16489210,16489486-16489806,16489878-16489919 28 6.2
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271... 27 8.2
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 27 8.2
08_01_1019 - 10290820-10291393,10293978-10294348 27 8.2
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 8.2
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 27 8.2
05_03_0060 - 7905455-7906216,7906723-7906887 27 8.2
02_05_0984 + 33320080-33320140,33320219-33320404,33320771-333210... 27 8.2
01_06_1747 + 39627938-39628441 27 8.2
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +1
Query: 19 EKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRY 198
EKP L GQRIKTRKR+ DP F DA+VQ GDL+ K ++S S L++ RY
Sbjct: 69 EKPTLGGQRIKTRKRNIAAPLDPASFSDAIVQIYLDNAGDLELVAKSIES--SDLNFSRY 126
Query: 199 GEVIFDVLIAGGLLLPG 249
G+ F+V+ GG PG
Sbjct: 127 GDTFFEVVFIGGRTQPG 143
>04_04_0670 -
27128153-27129075,27129152-27129266,27129348-27129537,
27129652-27129786,27129874-27129971,27131075-27131764
Length = 716
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 564 TKSSARLSFSRCSFTRTKHTDGGTHPLPIHSAVMRGQLDAAVRDRSLSSRPEPFSFPLRT 385
T++ ARL F+ FTR ++T T + +S + GQ + S+ P P
Sbjct: 106 TQALARLGFAARPFTRQENTVVQTCAVACYSIAVGGQDHPPLHPSSIRRLPSLMEIPTDW 165
Query: 384 FFPSTC 367
FF S C
Sbjct: 166 FFGSFC 171
>03_02_0390 + 8056006-8057502
Length = 498
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 77 SMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAKSYSM-----YSLLAACC 241
S T T SA+ S A + S+ + P +S+T + +S ++LLAA
Sbjct: 35 SFTSTASAS----TSSFTTATTFSARSSLSLPSFSSSTSLSPRPHSSSSSPHWALLAAA- 89
Query: 242 CRAVRVDGRRIAQDQHLHLLRQ*GYGHHAK 331
RA DG + + HLHL+R+ G+GH A+
Sbjct: 90 -RAATPDG--VLRLAHLHLIRELGHGHLAR 116
>03_02_0205 +
6389343-6389609,6390418-6390486,6390662-6390757,
6391120-6391244,6391331-6391483,6392863-6392992,
6393122-6393282,6393660-6393702,6393869-6394042,
6394471-6394525,6394567-6394746,6396234-6396339,
6396448-6396506,6397419-6397541,6397825-6397919
Length = 611
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 40 QRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRYGE 204
Q +KT R KY P+ +D G E ++ AAY+ L + Y R+GE
Sbjct: 77 QEVKTAYRTLARKYHPDMNKDP---GAEEKFKEISAAYEILSDEEKRSLYDRFGE 128
>10_08_0496 -
18328875-18328907,18329056-18329106,18329562-18329690,
18330491-18330524,18331252-18331280,18331801-18332945,
18333003-18333353,18334617-18334893
Length = 682
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 191 DAMAKSYSMYSLLAACCCRAVRVD 262
D + YS+L CCCRA R+D
Sbjct: 310 DEVTPDLCTYSILIGCCCRAGRLD 333
>04_04_0981 + 29912275-29912814
Length = 179
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 478 PQCSHARPA*CGCSGSKP 425
P+C+HARP C S S P
Sbjct: 33 PECAHARPCPCAASSSSP 50
>12_01_0779 + 7129879-7130398,7130585-7130664
Length = 199
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 569 PAQSPAPGCPSADVRSPGPS-TRMEARIRYRSTVQSCAASL 450
P P+P P+ + SPG S ++AR++Y + +C L
Sbjct: 157 PPPMPSPSIPNWKISSPGDSPDEVKARLKYWAQAVACTVRL 197
>10_08_0494 - 18308105-18309490
Length = 461
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 191 DAMAKSYSMYSLLAACCCRAVRVD 262
D + + YS+L CCCRA R+D
Sbjct: 78 DEVTPNLYTYSVLIGCCCRAGRLD 101
>08_01_0918 + 9043949-9045625
Length = 558
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 182 STTDAMAKSYSMYSLLAACCCRAVRVD 262
S+ A+ + Y +L CCCRA R+D
Sbjct: 89 SSDGAVTPTLHTYGILIGCCCRAGRLD 115
>07_03_1347 +
25932185-25932748,25933151-25933755,25935797-25936214,
25936433-25936555,25936775-25936989,25937157-25937412,
25937844-25938149,25938764-25938820,25939635-25939685
Length = 864
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 67 EKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRYGE-VIFD 216
EK+K DP GF D V A G ++ + S+G DY YGE V+FD
Sbjct: 62 EKDKDDPEGFYDHKVAA---ADGRMEGI--FWASSGLGWDYVYYGEVVVFD 107
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 306 WRRRCRCWSWAIRRPSTRTARQQQAASNEYIEYD 205
WRR R W A R + A +A NE +E+D
Sbjct: 364 WRREVRSWGLAGMRTTMMAASVAEANDNEGMEFD 397
>09_04_0740 + 19850745-19851254
Length = 169
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 266 RRIAQDQHLHLLRQ*GYGHHAKFRTGIRETDASVQVLGKNVRRGNEKGSGLLERLRSRTA 445
RR A+ + + R+ H +RT +D +++ G V G E G G L R+ + +
Sbjct: 68 RRAAEAEEILAAREKARPHIWTYRTVDEASDNWLRMYGHLVGLGGEDGGGGLVRVITPPS 127
Query: 446 ASSWPR 463
A++ PR
Sbjct: 128 AAAVPR 133
>06_01_0707 + 5136210-5136584
Length = 124
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 190 GSRVLIRPSLGTCRLRRDRHRPAP 119
G RVL+ PS GT LRR RP P
Sbjct: 70 GGRVLLSPS-GTSSLRRSHRRPPP 92
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 554 APGCPSADVRSPGPSTRMEARIRYRSTVQSCAASLMRLFGIEAFQVDQNLFHFL 393
+P P+A++ P+T+M S AS+ RLFG D + H L
Sbjct: 230 SPSIPTAELAMQAPNTKMSIATTDAKEASS-EASVFRLFGKSVVVKDSDQLHLL 282
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 202 RHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNR 89
R G+ +P G RLRR RH A P +R G R
Sbjct: 136 RGEAGAPEAEQPRGGAVRLRRLRHAAAVPPARQRHGRR 173
>11_04_0451 - 17863381-17864808
Length = 475
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 413 GLLERLRSRTAASSWPRMTALWIGNGCVPPSVCLVLVN 526
GL+ RLR +AAS + AL G +PPS V V+
Sbjct: 135 GLIPRLRLGSAASRAAALDALVDSVGSLPPSAAAVAVS 172
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 191 DAMAKSYSMYSLLAACCCRAVRVD 262
D + Y +L CCCRA R+D
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLD 104
>10_08_0210 - 15874289-15875663,15878248-15879263
Length = 796
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 386 VRRGNEKGSGLLERLRSRTAASSWPRMTALWIG 484
+R+G E G GL+ RS + + W ++ W G
Sbjct: 700 LRKGAELGMGLITAARSADSEALWKFLSDFWAG 732
>09_04_0350 + 16899076-16900164
Length = 362
Score = 27.9 bits (59), Expect = 6.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 336 RNFAWCPYPHWRRRCRCWSW 277
R W + WR+R CW W
Sbjct: 245 RRRTWRQHGEWRQRSGCWQW 264
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 377 GKNVRRGNEKGSGLLERLRSRTAA 448
GK RRG +G GLL+RL S +++
Sbjct: 36 GKGQRRGRGRGRGLLQRLPSSSSS 59
>05_03_0638 - 16489181-16489210,16489486-16489806,16489878-16489919
Length = 130
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 186 LPTLWRSHIRCTHCWRPAAAGRF 254
LP + + C +C RP AAGRF
Sbjct: 89 LPAVAADLVDCMNCGRPVAAGRF 111
>10_08_0809 -
20725858-20725950,20726375-20726545,20726895-20727101,
20727208-20727879
Length = 380
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 214 DVLIAGGLLLPGGSCRWTANRPRPTPASSP-PMRIWTPC 327
D ++ G LL+ GG+ R T P P P P+ TPC
Sbjct: 47 DGVMLGDLLVGGGNARNTLASPPPPSFPLPVPLTTTTPC 85
>10_08_0495 - 18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 218 YSLLAACCCRAVRVD 262
Y++L CCCRA R+D
Sbjct: 972 YAILIGCCCRAGRLD 986
>08_01_1019 - 10290820-10291393,10293978-10294348
Length = 314
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 186 LPTLWRSHIRCTHCWRPAAAGR---FVSMDGE 272
L +WR + C WR AAA R F ++D E
Sbjct: 37 LEDVWRGAMACCRAWRDAAASRPALFAALDLE 68
>06_01_1032 +
8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 377 GKNVRRGNEKGSGLLERLRSRTAASSWPRMTALWIGNGCVPP 502
G+N+R+G + G + SRT P T L +GN VPP
Sbjct: 228 GQNIRKGKQPGKAGTQGQLSRTVEHD-PSHT-LQVGNAQVPP 267
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 136 RHRPAPDPVPERRGNRS 86
R RPAPDPV RG+R+
Sbjct: 12 RRRPAPDPVAVLRGHRA 28
>05_03_0060 - 7905455-7906216,7906723-7906887
Length = 308
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 85 PNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRYGEVIFD-VLIAGGLLLPGGSCR 261
P G RDA ERA L ++ +D G+ ++ G + + V I GG L GG C
Sbjct: 130 PLGRRDATAASAERADAMLPDSFLGID--GALAMFQSKGMTVEETVAILGGHTLGGGHCA 187
Query: 262 W--TANRPR 282
TA R R
Sbjct: 188 TVDTARRGR 196
>02_05_0984 +
33320080-33320140,33320219-33320404,33320771-33321028,
33321147-33321625
Length = 327
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 299 EDAGVGLGRFAVHRHEPPGSSRPPAMSTSNMTSP 198
E+ VGLG A +H PG + + TSN+ P
Sbjct: 35 EEGRVGLGTPAPSQHPLPGGALTRRVDTSNLQEP 68
>01_06_1747 + 39627938-39628441
Length = 167
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 241 LPGGSCRWTANRPRPTPASSPPMRIW 318
LPGG R A P P S P R W
Sbjct: 33 LPGGGMRRRATSRLPAPRSPAPRRAW 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,114,232
Number of Sequences: 37544
Number of extensions: 498227
Number of successful extensions: 2227
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2224
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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